Cluster: ShaoY_2019_ERR3405592_bin.2_CGC11
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405592_bin.2
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405592_bin.2_k141_1444 | ShaoY_2019_ERR3405592_bin.2_k141_1444_215 | 196123 | 197406 | + | 2.A.40.1.4 |
| TC | ShaoY_2019_ERR3405592_bin.2_k141_1444 | ShaoY_2019_ERR3405592_bin.2_k141_1444_216 | 197451 | 198356 | - | 2.A.7.3.31 |
| peptidase | ShaoY_2019_ERR3405592_bin.2_k141_1444 | ShaoY_2019_ERR3405592_bin.2_k141_1444_217 | 198365 | 199300 | - | S12.950 |
| pfam | ShaoY_2019_ERR3405592_bin.2_k141_1444 | ShaoY_2019_ERR3405592_bin.2_k141_1444_218 | 199297 | 200022 | - | CppA_N | CppA_C |
| TC | ShaoY_2019_ERR3405592_bin.2_k141_1444 | ShaoY_2019_ERR3405592_bin.2_k141_1444_219 | 200133 | 201002 | - | 1.A.8.2.2 |
| pfam | ShaoY_2019_ERR3405592_bin.2_k141_1444 | ShaoY_2019_ERR3405592_bin.2_k141_1444_220 | 201160 | 202326 | - | CPSase_L_D2 | ATP-grasp_4 |
| peptidase | ShaoY_2019_ERR3405592_bin.2_k141_1444 | ShaoY_2019_ERR3405592_bin.2_k141_1444_221 | 202339 | 203079 | - | S09.UPW |
| CAZyme | ShaoY_2019_ERR3405592_bin.2_k141_1444 | ShaoY_2019_ERR3405592_bin.2_k141_1444_222 | 203100 | 203924 | - | CE1 |
Gene ID: ShaoY_2019_ERR3405592_bin.2_k141_1444_215
Type: TC
Location: 196123 - 197406 (+)
Type: TC
Location: 196123 - 197406 (+)
Gene ID: ShaoY_2019_ERR3405592_bin.2_k141_1444_216
Type: TC
Location: 197451 - 198356 (-)
Type: TC
Location: 197451 - 198356 (-)
Gene ID: ShaoY_2019_ERR3405592_bin.2_k141_1444_217
Type: peptidase
Location: 198365 - 199300 (-)
Type: peptidase
Location: 198365 - 199300 (-)
Gene ID: ShaoY_2019_ERR3405592_bin.2_k141_1444_218
Type: pfam
Location: 199297 - 200022 (-)
Type: pfam
Location: 199297 - 200022 (-)
Gene ID: ShaoY_2019_ERR3405592_bin.2_k141_1444_219
Type: TC
Location: 200133 - 201002 (-)
Type: TC
Location: 200133 - 201002 (-)
Gene ID: ShaoY_2019_ERR3405592_bin.2_k141_1444_220
Type: pfam
Location: 201160 - 202326 (-)
Type: pfam
Location: 201160 - 202326 (-)
Gene ID: ShaoY_2019_ERR3405592_bin.2_k141_1444_221
Type: peptidase
Location: 202339 - 203079 (-)
Type: peptidase
Location: 202339 - 203079 (-)
Gene ID: ShaoY_2019_ERR3405592_bin.2_k141_1444_222
Type: CAZyme
Location: 203100 - 203924 (-)
Type: CAZyme
Location: 203100 - 203924 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.