Cluster: ShaoY_2019_ERR3405591_bin.6_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405591_bin.6
- CGC Family ID: CGCFAM_00172
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405591_bin.6_k141_3506 | ShaoY_2019_ERR3405591_bin.6_k141_3506_26 | 23728 | 24642 | + | 3.A.1.144.3 |
| TC | ShaoY_2019_ERR3405591_bin.6_k141_3506 | ShaoY_2019_ERR3405591_bin.6_k141_3506_27 | 24639 | 25430 | + | 3.A.1.144.2 |
| CAZyme | ShaoY_2019_ERR3405591_bin.6_k141_3506 | ShaoY_2019_ERR3405591_bin.6_k141_3506_28 | 25598 | 26311 | - | GT51 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405591_bin.6_k141_3506 | ShaoY_2019_ERR3405591_bin.6_k141_3506_29 | 26343 | 26444 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | ShaoY_2019_ERR3405591_bin.6_k141_3506 | ShaoY_2019_ERR3405591_bin.6_k141_3506_30 | 26459 | 28444 | - | 3.A.1.134.9 |
| TC | ShaoY_2019_ERR3405591_bin.6_k141_3506 | ShaoY_2019_ERR3405591_bin.6_k141_3506_31 | 28437 | 29204 | - | 3.A.1.134.4 |
Gene ID: ShaoY_2019_ERR3405591_bin.6_k141_3506_26
Type: TC
Location: 23728 - 24642 (+)
Type: TC
Location: 23728 - 24642 (+)
Gene ID: ShaoY_2019_ERR3405591_bin.6_k141_3506_27
Type: TC
Location: 24639 - 25430 (+)
Type: TC
Location: 24639 - 25430 (+)
Gene ID: ShaoY_2019_ERR3405591_bin.6_k141_3506_28
Type: CAZyme
Location: 25598 - 26311 (-)
Type: CAZyme
Location: 25598 - 26311 (-)
Gene ID: ShaoY_2019_ERR3405591_bin.6_k141_3506_29
Type:
Location: 26343 - 26444 (-)
Type:
Location: 26343 - 26444 (-)
Gene ID: ShaoY_2019_ERR3405591_bin.6_k141_3506_30
Type: TC
Location: 26459 - 28444 (-)
Type: TC
Location: 26459 - 28444 (-)
Gene ID: ShaoY_2019_ERR3405591_bin.6_k141_3506_31
Type: TC
Location: 28437 - 29204 (-)
Type: TC
Location: 28437 - 29204 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scatavimonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.