Cluster: ShaoY_2019_ERR3405591_bin.6_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405591_bin.6
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405591_bin.6_k141_3006 | ShaoY_2019_ERR3405591_bin.6_k141_3006_1 | 663 | 1373 | - | 3.A.1.24.5 |
| TC | ShaoY_2019_ERR3405591_bin.6_k141_3006 | ShaoY_2019_ERR3405591_bin.6_k141_3006_2 | 1366 | 2376 | - | 3.A.1.24.2 |
| TC | ShaoY_2019_ERR3405591_bin.6_k141_3006 | ShaoY_2019_ERR3405591_bin.6_k141_3006_3 | 2452 | 3297 | - | 3.A.1.24.5 |
| TF | ShaoY_2019_ERR3405591_bin.6_k141_3006 | ShaoY_2019_ERR3405591_bin.6_k141_3006_4 | 3787 | 4734 | - | HTH_1 |
| pfam | ShaoY_2019_ERR3405591_bin.6_k141_3006 | ShaoY_2019_ERR3405591_bin.6_k141_3006_5 | 5016 | 5561 | + | DUF4854 |
| CAZyme | ShaoY_2019_ERR3405591_bin.6_k141_3006 | ShaoY_2019_ERR3405591_bin.6_k141_3006_6 | 5689 | 6981 | + | GH18 |
Gene ID: ShaoY_2019_ERR3405591_bin.6_k141_3006_1
Type: TC
Location: 663 - 1373 (-)
Type: TC
Location: 663 - 1373 (-)
Gene ID: ShaoY_2019_ERR3405591_bin.6_k141_3006_2
Type: TC
Location: 1366 - 2376 (-)
Type: TC
Location: 1366 - 2376 (-)
Gene ID: ShaoY_2019_ERR3405591_bin.6_k141_3006_3
Type: TC
Location: 2452 - 3297 (-)
Type: TC
Location: 2452 - 3297 (-)
Gene ID: ShaoY_2019_ERR3405591_bin.6_k141_3006_4
Type: TF
Location: 3787 - 4734 (-)
Type: TF
Location: 3787 - 4734 (-)
Gene ID: ShaoY_2019_ERR3405591_bin.6_k141_3006_5
Type: pfam
Location: 5016 - 5561 (+)
Type: pfam
Location: 5016 - 5561 (+)
Gene ID: ShaoY_2019_ERR3405591_bin.6_k141_3006_6
Type: CAZyme
Location: 5689 - 6981 (+)
Type: CAZyme
Location: 5689 - 6981 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scatavimonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.