Cluster: ShaoY_2019_ERR3405591_bin.6_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: ShaoY_2019_ERR3405591_bin.6
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405591_bin.6_k141_1058 | ShaoY_2019_ERR3405591_bin.6_k141_1058_30 | 28939 | 30759 | - | GH13_4 |
| pfam | ShaoY_2019_ERR3405591_bin.6_k141_1058 | ShaoY_2019_ERR3405591_bin.6_k141_1058_31 | 30765 | 31403 | - | Hydrolase | HAD_2 |
| CAZyme | ShaoY_2019_ERR3405591_bin.6_k141_1058 | ShaoY_2019_ERR3405591_bin.6_k141_1058_32 | 31400 | 33088 | - | GH13_31 |
| TC | ShaoY_2019_ERR3405591_bin.6_k141_1058 | ShaoY_2019_ERR3405591_bin.6_k141_1058_33 | 33263 | 34093 | - | 3.A.1.1.34 |
| TC | ShaoY_2019_ERR3405591_bin.6_k141_1058 | ShaoY_2019_ERR3405591_bin.6_k141_1058_34 | 34110 | 35057 | - | 3.A.1.1.4 |
| STP | ShaoY_2019_ERR3405591_bin.6_k141_1058 | ShaoY_2019_ERR3405591_bin.6_k141_1058_35 | 35142 | 36440 | - | SBP_bac_1 |
| CAZyme | ShaoY_2019_ERR3405591_bin.6_k141_1058 | ShaoY_2019_ERR3405591_bin.6_k141_1058_36 | 36525 | 38849 | - | GH65 |
Gene ID: ShaoY_2019_ERR3405591_bin.6_k141_1058_30
Type: CAZyme
Location: 28939 - 30759 (-)
Type: CAZyme
Location: 28939 - 30759 (-)
Gene ID: ShaoY_2019_ERR3405591_bin.6_k141_1058_31
Type: pfam
Location: 30765 - 31403 (-)
Type: pfam
Location: 30765 - 31403 (-)
Gene ID: ShaoY_2019_ERR3405591_bin.6_k141_1058_32
Type: CAZyme
Location: 31400 - 33088 (-)
Type: CAZyme
Location: 31400 - 33088 (-)
Gene ID: ShaoY_2019_ERR3405591_bin.6_k141_1058_33
Type: TC
Location: 33263 - 34093 (-)
Type: TC
Location: 33263 - 34093 (-)
Gene ID: ShaoY_2019_ERR3405591_bin.6_k141_1058_34
Type: TC
Location: 34110 - 35057 (-)
Type: TC
Location: 34110 - 35057 (-)
Gene ID: ShaoY_2019_ERR3405591_bin.6_k141_1058_35
Type: STP
Location: 35142 - 36440 (-)
Type: STP
Location: 35142 - 36440 (-)
Gene ID: ShaoY_2019_ERR3405591_bin.6_k141_1058_36
Type: CAZyme
Location: 36525 - 38849 (-)
Type: CAZyme
Location: 36525 - 38849 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scatavimonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.