Cluster: ShaoY_2019_ERR3405591_bin.6_CGC22
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3405591_bin.6
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405591_bin.6_k141_7017 | ShaoY_2019_ERR3405591_bin.6_k141_7017_9 | 8463 | 10100 | - | GH13_36 |
| TC | ShaoY_2019_ERR3405591_bin.6_k141_7017 | ShaoY_2019_ERR3405591_bin.6_k141_7017_10 | 10180 | 11034 | - | 3.A.1.1.27 |
| TC | ShaoY_2019_ERR3405591_bin.6_k141_7017 | ShaoY_2019_ERR3405591_bin.6_k141_7017_11 | 11031 | 12527 | - | 3.A.1.1.27 |
| pfam | ShaoY_2019_ERR3405591_bin.6_k141_7017 | ShaoY_2019_ERR3405591_bin.6_k141_7017_12 | 12677 | 14041 | - | SBP_bac_8 |
| pfam | ShaoY_2019_ERR3405591_bin.6_k141_7017 | ShaoY_2019_ERR3405591_bin.6_k141_7017_13 | 14614 | 16080 | + | Mur_ligase | Mur_ligase_C | Mur_ligase_M |
| CAZyme | ShaoY_2019_ERR3405591_bin.6_k141_7017 | ShaoY_2019_ERR3405591_bin.6_k141_7017_14 | 16895 | 19099 | - | GH13_28 |
| TC | ShaoY_2019_ERR3405591_bin.6_k141_7017 | ShaoY_2019_ERR3405591_bin.6_k141_7017_15 | 19338 | 19916 | + | 2.A.107.1.2 |
| TC | ShaoY_2019_ERR3405591_bin.6_k141_7017 | ShaoY_2019_ERR3405591_bin.6_k141_7017_16 | 19980 | 21728 | - | 2.A.58.2.2 |
Gene ID: ShaoY_2019_ERR3405591_bin.6_k141_7017_9
Type: CAZyme
Location: 8463 - 10100 (-)
Type: CAZyme
Location: 8463 - 10100 (-)
Gene ID: ShaoY_2019_ERR3405591_bin.6_k141_7017_10
Type: TC
Location: 10180 - 11034 (-)
Type: TC
Location: 10180 - 11034 (-)
Gene ID: ShaoY_2019_ERR3405591_bin.6_k141_7017_11
Type: TC
Location: 11031 - 12527 (-)
Type: TC
Location: 11031 - 12527 (-)
Gene ID: ShaoY_2019_ERR3405591_bin.6_k141_7017_12
Type: pfam
Location: 12677 - 14041 (-)
Type: pfam
Location: 12677 - 14041 (-)
Gene ID: ShaoY_2019_ERR3405591_bin.6_k141_7017_13
Type: pfam
Location: 14614 - 16080 (+)
Type: pfam
Location: 14614 - 16080 (+)
Gene ID: ShaoY_2019_ERR3405591_bin.6_k141_7017_14
Type: CAZyme
Location: 16895 - 19099 (-)
Type: CAZyme
Location: 16895 - 19099 (-)
Gene ID: ShaoY_2019_ERR3405591_bin.6_k141_7017_15
Type: TC
Location: 19338 - 19916 (+)
Type: TC
Location: 19338 - 19916 (+)
Gene ID: ShaoY_2019_ERR3405591_bin.6_k141_7017_16
Type: TC
Location: 19980 - 21728 (-)
Type: TC
Location: 19980 - 21728 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scatavimonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.