Cluster: ShaoY_2019_ERR3405591_bin.6_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405591_bin.6
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405591_bin.6_k141_5210 | ShaoY_2019_ERR3405591_bin.6_k141_5210_12 | 11635 | 13377 | - | 3.A.1.106.2 |
| TC | ShaoY_2019_ERR3405591_bin.6_k141_5210 | ShaoY_2019_ERR3405591_bin.6_k141_5210_13 | 13395 | 15125 | - | 3.A.1.135.5 |
| pfam | ShaoY_2019_ERR3405591_bin.6_k141_5210 | ShaoY_2019_ERR3405591_bin.6_k141_5210_14 | 15149 | 16117 | - | Carbam_trans_N |
| pfam | ShaoY_2019_ERR3405591_bin.6_k141_5210 | ShaoY_2019_ERR3405591_bin.6_k141_5210_15 | 16137 | 17348 | - | ketoacyl-synt | Ketoacyl-synt_C |
| CAZyme | ShaoY_2019_ERR3405591_bin.6_k141_5210 | ShaoY_2019_ERR3405591_bin.6_k141_5210_16 | 17348 | 18307 | - | GT2 |
Gene ID: ShaoY_2019_ERR3405591_bin.6_k141_5210_12
Type: TC
Location: 11635 - 13377 (-)
Type: TC
Location: 11635 - 13377 (-)
Gene ID: ShaoY_2019_ERR3405591_bin.6_k141_5210_13
Type: TC
Location: 13395 - 15125 (-)
Type: TC
Location: 13395 - 15125 (-)
Gene ID: ShaoY_2019_ERR3405591_bin.6_k141_5210_14
Type: pfam
Location: 15149 - 16117 (-)
Type: pfam
Location: 15149 - 16117 (-)
Gene ID: ShaoY_2019_ERR3405591_bin.6_k141_5210_15
Type: pfam
Location: 16137 - 17348 (-)
Type: pfam
Location: 16137 - 17348 (-)
Gene ID: ShaoY_2019_ERR3405591_bin.6_k141_5210_16
Type: CAZyme
Location: 17348 - 18307 (-)
Type: CAZyme
Location: 17348 - 18307 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scatavimonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.