Cluster: ShaoY_2019_ERR3405591_bin.6_CGC16
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405591_bin.6
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405591_bin.6_k141_4595 | ShaoY_2019_ERR3405591_bin.6_k141_4595_40 | 51703 | 55863 | + | CBM13 | CBM13 | CBM13 | CBM13 | CBM13 | CBM13 | GH25 |
| pfam | ShaoY_2019_ERR3405591_bin.6_k141_4595 | ShaoY_2019_ERR3405591_bin.6_k141_4595_41 | 56265 | 57611 | - | Dockerin_1 |
| TC | ShaoY_2019_ERR3405591_bin.6_k141_4595 | ShaoY_2019_ERR3405591_bin.6_k141_4595_42 | 58050 | 60731 | + | 3.A.3.2.21 |
Gene ID: ShaoY_2019_ERR3405591_bin.6_k141_4595_40
Type: CAZyme
Location: 51703 - 55863 (+)
Type: CAZyme
Location: 51703 - 55863 (+)
Gene ID: ShaoY_2019_ERR3405591_bin.6_k141_4595_41
Type: pfam
Location: 56265 - 57611 (-)
Type: pfam
Location: 56265 - 57611 (-)
Gene ID: ShaoY_2019_ERR3405591_bin.6_k141_4595_42
Type: TC
Location: 58050 - 60731 (+)
Type: TC
Location: 58050 - 60731 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scatavimonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.