Cluster: ShaoY_2019_ERR3405591_bin.6_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405591_bin.6
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405591_bin.6_k141_4175 | ShaoY_2019_ERR3405591_bin.6_k141_4175_23 | 21160 | 22206 | + | GH179 |
| pfam | ShaoY_2019_ERR3405591_bin.6_k141_4175 | ShaoY_2019_ERR3405591_bin.6_k141_4175_24 | 22212 | 23126 | + | AP_endonuc_2 |
| pfam | ShaoY_2019_ERR3405591_bin.6_k141_4175 | ShaoY_2019_ERR3405591_bin.6_k141_4175_25 | 23202 | 24281 | + | Peripla_BP_4 |
| TC | ShaoY_2019_ERR3405591_bin.6_k141_4175 | ShaoY_2019_ERR3405591_bin.6_k141_4175_26 | 24386 | 25909 | + | 3.A.1.2.20 |
| TC | ShaoY_2019_ERR3405591_bin.6_k141_4175 | ShaoY_2019_ERR3405591_bin.6_k141_4175_27 | 25879 | 26943 | + | 3.A.1.2.1 |
Gene ID: ShaoY_2019_ERR3405591_bin.6_k141_4175_23
Type: CAZyme
Location: 21160 - 22206 (+)
Type: CAZyme
Location: 21160 - 22206 (+)
Gene ID: ShaoY_2019_ERR3405591_bin.6_k141_4175_24
Type: pfam
Location: 22212 - 23126 (+)
Type: pfam
Location: 22212 - 23126 (+)
Gene ID: ShaoY_2019_ERR3405591_bin.6_k141_4175_25
Type: pfam
Location: 23202 - 24281 (+)
Type: pfam
Location: 23202 - 24281 (+)
Gene ID: ShaoY_2019_ERR3405591_bin.6_k141_4175_26
Type: TC
Location: 24386 - 25909 (+)
Type: TC
Location: 24386 - 25909 (+)
Gene ID: ShaoY_2019_ERR3405591_bin.6_k141_4175_27
Type: TC
Location: 25879 - 26943 (+)
Type: TC
Location: 25879 - 26943 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scatavimonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.