Cluster: ShaoY_2019_ERR3405254_bin.1_CGC1
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 5
- Substrate:
- Genome ID: ShaoY_2019_ERR3405254_bin.1
- CGC Family ID: CGCFAM_00463
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405254_bin.1_k141_293 | ShaoY_2019_ERR3405254_bin.1_k141_293_10 | 7982 | 9502 | - | GT4 |
| TC | ShaoY_2019_ERR3405254_bin.1_k141_293 | ShaoY_2019_ERR3405254_bin.1_k141_293_11 | 9514 | 11886 | - | 3.A.5.10.1 |
| TC | ShaoY_2019_ERR3405254_bin.1_k141_293 | ShaoY_2019_ERR3405254_bin.1_k141_293_12 | 11879 | 12319 | - | 3.A.5.10.1 |
| TC | ShaoY_2019_ERR3405254_bin.1_k141_293 | ShaoY_2019_ERR3405254_bin.1_k141_293_13 | 12316 | 13848 | - | 3.A.5.10.1 |
| TC | ShaoY_2019_ERR3405254_bin.1_k141_293 | ShaoY_2019_ERR3405254_bin.1_k141_293_14 | 13832 | 15412 | - | 3.A.5.10.1 |
| TC | ShaoY_2019_ERR3405254_bin.1_k141_293 | ShaoY_2019_ERR3405254_bin.1_k141_293_15 | 15422 | 16639 | - | 3.A.5.10.1 |
| CAZyme | ShaoY_2019_ERR3405254_bin.1_k141_293 | ShaoY_2019_ERR3405254_bin.1_k141_293_16 | 16770 | 17966 | - | GT8 |
| CAZyme | ShaoY_2019_ERR3405254_bin.1_k141_293 | ShaoY_2019_ERR3405254_bin.1_k141_293_17 | 17963 | 19192 | - | GT8 |
| CAZyme | ShaoY_2019_ERR3405254_bin.1_k141_293 | ShaoY_2019_ERR3405254_bin.1_k141_293_18 | 19207 | 21660 | - | GT101 | GT8 |
| CAZyme | ShaoY_2019_ERR3405254_bin.1_k141_293 | ShaoY_2019_ERR3405254_bin.1_k141_293_19 | 21669 | 22703 | - | GT113 |
Gene ID: ShaoY_2019_ERR3405254_bin.1_k141_293_10
Type: CAZyme
Location: 7982 - 9502 (-)
Type: CAZyme
Location: 7982 - 9502 (-)
Gene ID: ShaoY_2019_ERR3405254_bin.1_k141_293_11
Type: TC
Location: 9514 - 11886 (-)
Type: TC
Location: 9514 - 11886 (-)
Gene ID: ShaoY_2019_ERR3405254_bin.1_k141_293_12
Type: TC
Location: 11879 - 12319 (-)
Type: TC
Location: 11879 - 12319 (-)
Gene ID: ShaoY_2019_ERR3405254_bin.1_k141_293_13
Type: TC
Location: 12316 - 13848 (-)
Type: TC
Location: 12316 - 13848 (-)
Gene ID: ShaoY_2019_ERR3405254_bin.1_k141_293_14
Type: TC
Location: 13832 - 15412 (-)
Type: TC
Location: 13832 - 15412 (-)
Gene ID: ShaoY_2019_ERR3405254_bin.1_k141_293_15
Type: TC
Location: 15422 - 16639 (-)
Type: TC
Location: 15422 - 16639 (-)
Gene ID: ShaoY_2019_ERR3405254_bin.1_k141_293_16
Type: CAZyme
Location: 16770 - 17966 (-)
Type: CAZyme
Location: 16770 - 17966 (-)
Gene ID: ShaoY_2019_ERR3405254_bin.1_k141_293_17
Type: CAZyme
Location: 17963 - 19192 (-)
Type: CAZyme
Location: 17963 - 19192 (-)
Gene ID: ShaoY_2019_ERR3405254_bin.1_k141_293_18
Type: CAZyme
Location: 19207 - 21660 (-)
Type: CAZyme
Location: 19207 - 21660 (-)
Gene ID: ShaoY_2019_ERR3405254_bin.1_k141_293_19
Type: CAZyme
Location: 21669 - 22703 (-)
Type: CAZyme
Location: 21669 - 22703 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.