Cluster: ShaoY_2019_ERR3405071_bin.7_CGC5
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3405071_bin.7
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405071_bin.7_k141_14690 | ShaoY_2019_ERR3405071_bin.7_k141_14690_19 | 15343 | 16413 | + | 3.A.1.20.4 |
| TC | ShaoY_2019_ERR3405071_bin.7_k141_14690 | ShaoY_2019_ERR3405071_bin.7_k141_14690_20 | 16461 | 18110 | + | 3.A.1.20.1 |
| TC | ShaoY_2019_ERR3405071_bin.7_k141_14690 | ShaoY_2019_ERR3405071_bin.7_k141_14690_21 | 18121 | 19065 | + | 3.A.1.11.8 |
| pfam | ShaoY_2019_ERR3405071_bin.7_k141_14690 | ShaoY_2019_ERR3405071_bin.7_k141_14690_22 | 19120 | 19479 | - | FMN_bind |
| pfam | ShaoY_2019_ERR3405071_bin.7_k141_14690 | ShaoY_2019_ERR3405071_bin.7_k141_14690_23 | 19479 | 21470 | - | Transketolase_N | Transket_pyr | Transketolase_C | Transketolase_C_1 |
| CAZyme | ShaoY_2019_ERR3405071_bin.7_k141_14690 | ShaoY_2019_ERR3405071_bin.7_k141_14690_24 | 21460 | 22275 | - | GT26 |
| pfam | ShaoY_2019_ERR3405071_bin.7_k141_14690 | ShaoY_2019_ERR3405071_bin.7_k141_14690_25 | 22250 | 23350 | - | PS_pyruv_trans |
| TC | ShaoY_2019_ERR3405071_bin.7_k141_14690 | ShaoY_2019_ERR3405071_bin.7_k141_14690_26 | 23328 | 24698 | - | 9.B.67.1.1 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405071_bin.7_k141_14690 | ShaoY_2019_ERR3405071_bin.7_k141_14690_27 | 24683 | 25243 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | ShaoY_2019_ERR3405071_bin.7_k141_14690 | ShaoY_2019_ERR3405071_bin.7_k141_14690_28 | 25247 | 25729 | - | DUF4330 |
| CAZyme | ShaoY_2019_ERR3405071_bin.7_k141_14690 | ShaoY_2019_ERR3405071_bin.7_k141_14690_29 | 25719 | 26846 | - | GT4 |
Gene ID: ShaoY_2019_ERR3405071_bin.7_k141_14690_19
Type: TC
Location: 15343 - 16413 (+)
Type: TC
Location: 15343 - 16413 (+)
Gene ID: ShaoY_2019_ERR3405071_bin.7_k141_14690_20
Type: TC
Location: 16461 - 18110 (+)
Type: TC
Location: 16461 - 18110 (+)
Gene ID: ShaoY_2019_ERR3405071_bin.7_k141_14690_21
Type: TC
Location: 18121 - 19065 (+)
Type: TC
Location: 18121 - 19065 (+)
Gene ID: ShaoY_2019_ERR3405071_bin.7_k141_14690_22
Type: pfam
Location: 19120 - 19479 (-)
Type: pfam
Location: 19120 - 19479 (-)
Gene ID: ShaoY_2019_ERR3405071_bin.7_k141_14690_23
Type: pfam
Location: 19479 - 21470 (-)
Type: pfam
Location: 19479 - 21470 (-)
Gene ID: ShaoY_2019_ERR3405071_bin.7_k141_14690_24
Type: CAZyme
Location: 21460 - 22275 (-)
Type: CAZyme
Location: 21460 - 22275 (-)
Gene ID: ShaoY_2019_ERR3405071_bin.7_k141_14690_25
Type: pfam
Location: 22250 - 23350 (-)
Type: pfam
Location: 22250 - 23350 (-)
Gene ID: ShaoY_2019_ERR3405071_bin.7_k141_14690_26
Type: TC
Location: 23328 - 24698 (-)
Type: TC
Location: 23328 - 24698 (-)
Gene ID: ShaoY_2019_ERR3405071_bin.7_k141_14690_27
Type:
Location: 24683 - 25243 (-)
Type:
Location: 24683 - 25243 (-)
Gene ID: ShaoY_2019_ERR3405071_bin.7_k141_14690_28
Type: pfam
Location: 25247 - 25729 (-)
Type: pfam
Location: 25247 - 25729 (-)
Gene ID: ShaoY_2019_ERR3405071_bin.7_k141_14690_29
Type: CAZyme
Location: 25719 - 26846 (-)
Type: CAZyme
Location: 25719 - 26846 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Aedoeadaptatus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.