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Cluster: ShaoY_2019_ERR3405029_bin.11_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3405029_bin.11_k141_379 ShaoY_2019_ERR3405029_bin.11_k141_379_16 14407 15453 - 9.B.18.2.1
pfam ShaoY_2019_ERR3405029_bin.11_k141_379 ShaoY_2019_ERR3405029_bin.11_k141_379_17 15515 16840 - Polysacc_synt | Polysacc_synt_3
CAZyme ShaoY_2019_ERR3405029_bin.11_k141_379 ShaoY_2019_ERR3405029_bin.11_k141_379_18 16953 17990 - GT100
pfam ShaoY_2019_ERR3405029_bin.11_k141_379 ShaoY_2019_ERR3405029_bin.11_k141_379_19 17983 19125 - Wzy_C
pfam ShaoY_2019_ERR3405029_bin.11_k141_379 ShaoY_2019_ERR3405029_bin.11_k141_379_20 19624 20031 - Alg14
TC ShaoY_2019_ERR3405029_bin.11_k141_379 ShaoY_2019_ERR3405029_bin.11_k141_379_21 20092 20892 - 9.B.18.1.2
Gene ID: ShaoY_2019_ERR3405029_bin.11_k141_379_16
Type: TC
Location: 14407 - 15453 (-)
Gene ID: ShaoY_2019_ERR3405029_bin.11_k141_379_17
Type: pfam
Location: 15515 - 16840 (-)
Gene ID: ShaoY_2019_ERR3405029_bin.11_k141_379_18
Type: CAZyme
Location: 16953 - 17990 (-)
Gene ID: ShaoY_2019_ERR3405029_bin.11_k141_379_19
Type: pfam
Location: 17983 - 19125 (-)
Gene ID: ShaoY_2019_ERR3405029_bin.11_k141_379_20
Type: pfam
Location: 19624 - 20031 (-)
Gene ID: ShaoY_2019_ERR3405029_bin.11_k141_379_21
Type: TC
Location: 20092 - 20892 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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