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Cluster: ShaoY_2019_ERR3405029_bin.11_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3405029_bin.11_k141_4833 ShaoY_2019_ERR3405029_bin.11_k141_4833_57 58956 60314 - 2.A.33.1.1
pfam ShaoY_2019_ERR3405029_bin.11_k141_4833 ShaoY_2019_ERR3405029_bin.11_k141_4833_58 60582 61505 - DHH | DHHA2
STP ShaoY_2019_ERR3405029_bin.11_k141_4833 ShaoY_2019_ERR3405029_bin.11_k141_4833_59 61633 62586 - Glucokinase
TC ShaoY_2019_ERR3405029_bin.11_k141_4833 ShaoY_2019_ERR3405029_bin.11_k141_4833_60 62828 63160 - 4.A.3.2.3
TC ShaoY_2019_ERR3405029_bin.11_k141_4833 ShaoY_2019_ERR3405029_bin.11_k141_4833_61 63170 63472 - 4.A.3.2.9
TC ShaoY_2019_ERR3405029_bin.11_k141_4833 ShaoY_2019_ERR3405029_bin.11_k141_4833_62 63634 64977 - 4.A.3.2.2
CAZyme ShaoY_2019_ERR3405029_bin.11_k141_4833 ShaoY_2019_ERR3405029_bin.11_k141_4833_63 65098 66498 - GH1
Gene ID: ShaoY_2019_ERR3405029_bin.11_k141_4833_57
Type: TC
Location: 58956 - 60314 (-)
Gene ID: ShaoY_2019_ERR3405029_bin.11_k141_4833_58
Type: pfam
Location: 60582 - 61505 (-)
Gene ID: ShaoY_2019_ERR3405029_bin.11_k141_4833_59
Type: STP
Location: 61633 - 62586 (-)
Gene ID: ShaoY_2019_ERR3405029_bin.11_k141_4833_60
Type: TC
Location: 62828 - 63160 (-)
Gene ID: ShaoY_2019_ERR3405029_bin.11_k141_4833_61
Type: TC
Location: 63170 - 63472 (-)
Gene ID: ShaoY_2019_ERR3405029_bin.11_k141_4833_62
Type: TC
Location: 63634 - 64977 (-)
Gene ID: ShaoY_2019_ERR3405029_bin.11_k141_4833_63
Type: CAZyme
Location: 65098 - 66498 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
ShaoY_2019_ERR3405029_bin.11_k141_4833_61 vegan > omnivore 1.01452 0.00701

🧭 Explore Read Mapping of CGC

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