dbCAN HGM

Cluster: ShaoY_2019_ERR3405029_bin.11_CGC12

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	ShaoY_2019_ERR3405029_bin.11_k141_4833	ShaoY_2019_ERR3405029_bin.11_k141_4833_25	27632	28801	-	CE9
STP	ShaoY_2019_ERR3405029_bin.11_k141_4833	ShaoY_2019_ERR3405029_bin.11_k141_4833_26	28919	30085	-	SIS \| SIS
TF	ShaoY_2019_ERR3405029_bin.11_k141_4833	ShaoY_2019_ERR3405029_bin.11_k141_4833_27	30200	30931	-	GntR
TC	ShaoY_2019_ERR3405029_bin.11_k141_4833	ShaoY_2019_ERR3405029_bin.11_k141_4833_28	31116	32198	-	4.A.6.1.4
TC	ShaoY_2019_ERR3405029_bin.11_k141_4833	ShaoY_2019_ERR3405029_bin.11_k141_4833_29	32188	32988	-	4.A.6.1.4
TC	ShaoY_2019_ERR3405029_bin.11_k141_4833	ShaoY_2019_ERR3405029_bin.11_k141_4833_30	33079	33561	-	4.A.6.1.4
pfam	ShaoY_2019_ERR3405029_bin.11_k141_4833	ShaoY_2019_ERR3405029_bin.11_k141_4833_31	33598	33879	-	YajC
TC	ShaoY_2019_ERR3405029_bin.11_k141_4833	ShaoY_2019_ERR3405029_bin.11_k141_4833_32	33879	34322	-	4.A.6.1.16

Gene ID: ShaoY_2019_ERR3405029_bin.11_k141_4833_25
Type: CAZyme
Location: 27632 - 28801 (-)

Gene ID: ShaoY_2019_ERR3405029_bin.11_k141_4833_26
Type: STP
Location: 28919 - 30085 (-)

Gene ID: ShaoY_2019_ERR3405029_bin.11_k141_4833_27
Type: TF
Location: 30200 - 30931 (-)

Gene ID: ShaoY_2019_ERR3405029_bin.11_k141_4833_28
Type: TC
Location: 31116 - 32198 (-)

Gene ID: ShaoY_2019_ERR3405029_bin.11_k141_4833_29
Type: TC
Location: 32188 - 32988 (-)

Gene ID: ShaoY_2019_ERR3405029_bin.11_k141_4833_30
Type: TC
Location: 33079 - 33561 (-)

Gene ID: ShaoY_2019_ERR3405029_bin.11_k141_4833_31
Type: pfam
Location: 33598 - 33879 (-)

Gene ID: ShaoY_2019_ERR3405029_bin.11_k141_4833_32
Type: TC
Location: 33879 - 34322 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
ShaoY_2019_ERR3405029_bin.11_k141_4833_31	vegan > omnivore	1.03395	0.00701