dbCAN HGM

Cluster: ShaoY_2019_ERR3405000_bin.13_CGC7

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	ShaoY_2019_ERR3405000_bin.13_k141_4062	ShaoY_2019_ERR3405000_bin.13_k141_4062_20	23960	24886	-	CE7
TC	ShaoY_2019_ERR3405000_bin.13_k141_4062	ShaoY_2019_ERR3405000_bin.13_k141_4062_21	25018	25845	-	3.A.1.5.27
TC	ShaoY_2019_ERR3405000_bin.13_k141_4062	ShaoY_2019_ERR3405000_bin.13_k141_4062_22	25846	27861	-	3.A.1.5.25
TC	ShaoY_2019_ERR3405000_bin.13_k141_4062	ShaoY_2019_ERR3405000_bin.13_k141_4062_23	27865	28821	-	3.A.1.5.38
TC	ShaoY_2019_ERR3405000_bin.13_k141_4062	ShaoY_2019_ERR3405000_bin.13_k141_4062_24	28979	30592	-	3.A.1.5.27
pfam	ShaoY_2019_ERR3405000_bin.13_k141_4062	ShaoY_2019_ERR3405000_bin.13_k141_4062_25	30957	32897	-	GIY-YIG \| UVR \| UvrC_RNaseH_dom \| HHH_2 \| HHH_5 \| UvrC_RNaseH
TC	ShaoY_2019_ERR3405000_bin.13_k141_4062	ShaoY_2019_ERR3405000_bin.13_k141_4062_26	32904	34586	-	2.A.66.4.4

Gene ID: ShaoY_2019_ERR3405000_bin.13_k141_4062_20
Type: CAZyme
Location: 23960 - 24886 (-)

Gene ID: ShaoY_2019_ERR3405000_bin.13_k141_4062_21
Type: TC
Location: 25018 - 25845 (-)

Gene ID: ShaoY_2019_ERR3405000_bin.13_k141_4062_22
Type: TC
Location: 25846 - 27861 (-)

Gene ID: ShaoY_2019_ERR3405000_bin.13_k141_4062_23
Type: TC
Location: 27865 - 28821 (-)

Gene ID: ShaoY_2019_ERR3405000_bin.13_k141_4062_24
Type: TC
Location: 28979 - 30592 (-)

Gene ID: ShaoY_2019_ERR3405000_bin.13_k141_4062_25
Type: pfam
Location: 30957 - 32897 (-)

Gene ID: ShaoY_2019_ERR3405000_bin.13_k141_4062_26
Type: TC
Location: 32904 - 34586 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.