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Cluster: ShaoY_2019_ERR3405000_bin.13_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ShaoY_2019_ERR3405000_bin.13_k141_4062 ShaoY_2019_ERR3405000_bin.13_k141_4062_1 515 2248 - GH13_30
STP ShaoY_2019_ERR3405000_bin.13_k141_4062 ShaoY_2019_ERR3405000_bin.13_k141_4062_2 2835 3581 - STAS
STP ShaoY_2019_ERR3405000_bin.13_k141_4062 ShaoY_2019_ERR3405000_bin.13_k141_4062_3 3660 6005 - GAF | SpoIIE
TC ShaoY_2019_ERR3405000_bin.13_k141_4062 ShaoY_2019_ERR3405000_bin.13_k141_4062_4 6751 7779 - 3.A.1.5.36
TC ShaoY_2019_ERR3405000_bin.13_k141_4062 ShaoY_2019_ERR3405000_bin.13_k141_4062_5 7779 8870 - 3.A.1.5.34
TC ShaoY_2019_ERR3405000_bin.13_k141_4062 ShaoY_2019_ERR3405000_bin.13_k141_4062_6 8873 9808 - 3.A.1.5.11
TC ShaoY_2019_ERR3405000_bin.13_k141_4062 ShaoY_2019_ERR3405000_bin.13_k141_4062_7 9823 10860 - 3.A.1.5.37
TC ShaoY_2019_ERR3405000_bin.13_k141_4062 ShaoY_2019_ERR3405000_bin.13_k141_4062_8 11017 12693 - 3.A.1.5.35
Gene ID: ShaoY_2019_ERR3405000_bin.13_k141_4062_1
Type: CAZyme
Location: 515 - 2248 (-)
Gene ID: ShaoY_2019_ERR3405000_bin.13_k141_4062_2
Type: STP
Location: 2835 - 3581 (-)
Gene ID: ShaoY_2019_ERR3405000_bin.13_k141_4062_3
Type: STP
Location: 3660 - 6005 (-)
Gene ID: ShaoY_2019_ERR3405000_bin.13_k141_4062_4
Type: TC
Location: 6751 - 7779 (-)
Gene ID: ShaoY_2019_ERR3405000_bin.13_k141_4062_5
Type: TC
Location: 7779 - 8870 (-)
Gene ID: ShaoY_2019_ERR3405000_bin.13_k141_4062_6
Type: TC
Location: 8873 - 9808 (-)
Gene ID: ShaoY_2019_ERR3405000_bin.13_k141_4062_7
Type: TC
Location: 9823 - 10860 (-)
Gene ID: ShaoY_2019_ERR3405000_bin.13_k141_4062_8
Type: TC
Location: 11017 - 12693 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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