Cluster: ShaoY_2019_ERR3404958_bin.2_CGC7
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3404958_bin.2
- CGC Family ID: CGCFAM_00102
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3404958_bin.2_k141_1368 | ShaoY_2019_ERR3404958_bin.2_k141_1368_59 | 51356 | 52870 | - | GT4 |
| TC | ShaoY_2019_ERR3404958_bin.2_k141_1368 | ShaoY_2019_ERR3404958_bin.2_k141_1368_60 | 52882 | 55260 | - | 3.A.5.10.1 |
| pfam | ShaoY_2019_ERR3404958_bin.2_k141_1368 | ShaoY_2019_ERR3404958_bin.2_k141_1368_61 | 55291 | 55761 | - | Sec-ASP3 |
| TC | ShaoY_2019_ERR3404958_bin.2_k141_1368 | ShaoY_2019_ERR3404958_bin.2_k141_1368_62 | 55758 | 57302 | - | 3.A.5.10.1 |
| TC | ShaoY_2019_ERR3404958_bin.2_k141_1368 | ShaoY_2019_ERR3404958_bin.2_k141_1368_63 | 57295 | 58884 | - | 3.A.5.10.1 |
| TC | ShaoY_2019_ERR3404958_bin.2_k141_1368 | ShaoY_2019_ERR3404958_bin.2_k141_1368_64 | 58893 | 60110 | - | 3.A.5.10.1 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3404958_bin.2_k141_1368 | ShaoY_2019_ERR3404958_bin.2_k141_1368_65 | 60332 | 60547 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | ShaoY_2019_ERR3404958_bin.2_k141_1368 | ShaoY_2019_ERR3404958_bin.2_k141_1368_66 | 60550 | 61335 | - | GT113 |
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_1368_59
Type: CAZyme
Location: 51356 - 52870 (-)
Type: CAZyme
Location: 51356 - 52870 (-)
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_1368_60
Type: TC
Location: 52882 - 55260 (-)
Type: TC
Location: 52882 - 55260 (-)
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_1368_61
Type: pfam
Location: 55291 - 55761 (-)
Type: pfam
Location: 55291 - 55761 (-)
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_1368_62
Type: TC
Location: 55758 - 57302 (-)
Type: TC
Location: 55758 - 57302 (-)
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_1368_63
Type: TC
Location: 57295 - 58884 (-)
Type: TC
Location: 57295 - 58884 (-)
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_1368_64
Type: TC
Location: 58893 - 60110 (-)
Type: TC
Location: 58893 - 60110 (-)
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_1368_65
Type:
Location: 60332 - 60547 (-)
Type:
Location: 60332 - 60547 (-)
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_1368_66
Type: CAZyme
Location: 60550 - 61335 (-)
Type: CAZyme
Location: 60550 - 61335 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus sp030825825
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.