Cluster: ShaoY_2019_ERR3404958_bin.2_CGC27
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 4
- Substrate:
- Genome ID: ShaoY_2019_ERR3404958_bin.2
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3404958_bin.2_k141_4739 | ShaoY_2019_ERR3404958_bin.2_k141_4739_178 | 188786 | 190432 | - | 8.A.59.2.1 |
| TC | ShaoY_2019_ERR3404958_bin.2_k141_4739 | ShaoY_2019_ERR3404958_bin.2_k141_4739_179 | 190435 | 191046 | - | 9.B.28.1.12 |
| STP | ShaoY_2019_ERR3404958_bin.2_k141_4739 | ShaoY_2019_ERR3404958_bin.2_k141_4739_180 | 191218 | 192699 | - | SBP_bac_1 |
| TC | ShaoY_2019_ERR3404958_bin.2_k141_4739 | ShaoY_2019_ERR3404958_bin.2_k141_4739_181 | 192778 | 193710 | - | 3.A.1.1.29 |
| TC | ShaoY_2019_ERR3404958_bin.2_k141_4739 | ShaoY_2019_ERR3404958_bin.2_k141_4739_182 | 193724 | 194653 | - | 3.A.1.1.10 |
| CAZyme | ShaoY_2019_ERR3404958_bin.2_k141_4739 | ShaoY_2019_ERR3404958_bin.2_k141_4739_183 | 194879 | 196759 | - | GH20 |
| pfam | ShaoY_2019_ERR3404958_bin.2_k141_4739 | ShaoY_2019_ERR3404958_bin.2_k141_4739_184 | 196753 | 197622 | - | ROK |
| CAZyme | ShaoY_2019_ERR3404958_bin.2_k141_4739 | ShaoY_2019_ERR3404958_bin.2_k141_4739_185 | 197709 | 200354 | - | GH38 |
| CAZyme | ShaoY_2019_ERR3404958_bin.2_k141_4739 | ShaoY_2019_ERR3404958_bin.2_k141_4739_186 | 200431 | 201711 | - | GH125 |
| CAZyme | ShaoY_2019_ERR3404958_bin.2_k141_4739 | ShaoY_2019_ERR3404958_bin.2_k141_4739_187 | 201927 | 204002 | + | GH92 |
| pfam | ShaoY_2019_ERR3404958_bin.2_k141_4739 | ShaoY_2019_ERR3404958_bin.2_k141_4739_188 | 204037 | 204594 | - | DUF6287 |
| TC | ShaoY_2019_ERR3404958_bin.2_k141_4739 | ShaoY_2019_ERR3404958_bin.2_k141_4739_189 | 204733 | 206238 | - | 3.A.1.15.3 |
| TC | ShaoY_2019_ERR3404958_bin.2_k141_4739 | ShaoY_2019_ERR3404958_bin.2_k141_4739_190 | 206241 | 207044 | - | 3.A.1.15.3 |
| TC | ShaoY_2019_ERR3404958_bin.2_k141_4739 | ShaoY_2019_ERR3404958_bin.2_k141_4739_191 | 207037 | 207741 | - | 3.A.1.15.3 |
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_4739_178
Type: TC
Location: 188786 - 190432 (-)
Type: TC
Location: 188786 - 190432 (-)
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_4739_179
Type: TC
Location: 190435 - 191046 (-)
Type: TC
Location: 190435 - 191046 (-)
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_4739_180
Type: STP
Location: 191218 - 192699 (-)
Type: STP
Location: 191218 - 192699 (-)
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_4739_181
Type: TC
Location: 192778 - 193710 (-)
Type: TC
Location: 192778 - 193710 (-)
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_4739_182
Type: TC
Location: 193724 - 194653 (-)
Type: TC
Location: 193724 - 194653 (-)
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_4739_183
Type: CAZyme
Location: 194879 - 196759 (-)
Type: CAZyme
Location: 194879 - 196759 (-)
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_4739_184
Type: pfam
Location: 196753 - 197622 (-)
Type: pfam
Location: 196753 - 197622 (-)
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_4739_185
Type: CAZyme
Location: 197709 - 200354 (-)
Type: CAZyme
Location: 197709 - 200354 (-)
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_4739_186
Type: CAZyme
Location: 200431 - 201711 (-)
Type: CAZyme
Location: 200431 - 201711 (-)
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_4739_187
Type: CAZyme
Location: 201927 - 204002 (+)
Type: CAZyme
Location: 201927 - 204002 (+)
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_4739_188
Type: pfam
Location: 204037 - 204594 (-)
Type: pfam
Location: 204037 - 204594 (-)
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_4739_189
Type: TC
Location: 204733 - 206238 (-)
Type: TC
Location: 204733 - 206238 (-)
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_4739_190
Type: TC
Location: 206241 - 207044 (-)
Type: TC
Location: 206241 - 207044 (-)
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_4739_191
Type: TC
Location: 207037 - 207741 (-)
Type: TC
Location: 207037 - 207741 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus sp030825825
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.