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Cluster: ShaoY_2019_ERR3404958_bin.2_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3404958_bin.2_k141_4739 ShaoY_2019_ERR3404958_bin.2_k141_4739_157 162869 163186 - 3.A.14.1.2
TC ShaoY_2019_ERR3404958_bin.2_k141_4739 ShaoY_2019_ERR3404958_bin.2_k141_4739_158 163183 163992 - 3.A.14.1.1
TC ShaoY_2019_ERR3404958_bin.2_k141_4739 ShaoY_2019_ERR3404958_bin.2_k141_4739_159 164147 165088 - 3.A.14.1.1
pfam ShaoY_2019_ERR3404958_bin.2_k141_4739 ShaoY_2019_ERR3404958_bin.2_k141_4739_160 165176 165565 - DUF1033
CAZyme ShaoY_2019_ERR3404958_bin.2_k141_4739 ShaoY_2019_ERR3404958_bin.2_k141_4739_161 165786 166889 - GH8
CAZyme ShaoY_2019_ERR3404958_bin.2_k141_4739 ShaoY_2019_ERR3404958_bin.2_k141_4739_162 166898 168208 - GT2
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_4739_157
Type: TC
Location: 162869 - 163186 (-)
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_4739_158
Type: TC
Location: 163183 - 163992 (-)
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_4739_159
Type: TC
Location: 164147 - 165088 (-)
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_4739_160
Type: pfam
Location: 165176 - 165565 (-)
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_4739_161
Type: CAZyme
Location: 165786 - 166889 (-)
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_4739_162
Type: CAZyme
Location: 166898 - 168208 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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