Cluster: ShaoY_2019_ERR3404958_bin.2_CGC25
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3404958_bin.2
- CGC Family ID: CGCFAM_03664
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3404958_bin.2_k141_4739 | ShaoY_2019_ERR3404958_bin.2_k141_4739_88 | 97317 | 98702 | - | GH1 |
| peptidase | ShaoY_2019_ERR3404958_bin.2_k141_4739 | ShaoY_2019_ERR3404958_bin.2_k141_4739_89 | 98838 | 99533 | - | C26.UPW |
| TC | ShaoY_2019_ERR3404958_bin.2_k141_4739 | ShaoY_2019_ERR3404958_bin.2_k141_4739_90 | 99712 | 101232 | - | 3.A.1.12.8 |
| TC | ShaoY_2019_ERR3404958_bin.2_k141_4739 | ShaoY_2019_ERR3404958_bin.2_k141_4739_91 | 101225 | 101953 | - | 3.A.1.12.8 |
| pfam | ShaoY_2019_ERR3404958_bin.2_k141_4739 | ShaoY_2019_ERR3404958_bin.2_k141_4739_92 | 101946 | 102911 | - | ADH_N | ADH_zinc_N_2 |
| TF | ShaoY_2019_ERR3404958_bin.2_k141_4739 | ShaoY_2019_ERR3404958_bin.2_k141_4739_93 | 102929 | 103378 | - | MarR |
| TC | ShaoY_2019_ERR3404958_bin.2_k141_4739 | ShaoY_2019_ERR3404958_bin.2_k141_4739_94 | 103635 | 104618 | + | 3.A.1.23.1 |
| pfam | ShaoY_2019_ERR3404958_bin.2_k141_4739 | ShaoY_2019_ERR3404958_bin.2_k141_4739_95 | 104611 | 105399 | + | CbiQ |
| TC | ShaoY_2019_ERR3404958_bin.2_k141_4739 | ShaoY_2019_ERR3404958_bin.2_k141_4739_96 | 105412 | 106137 | + | 3.A.1.23.1 |
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_4739_88
Type: CAZyme
Location: 97317 - 98702 (-)
Type: CAZyme
Location: 97317 - 98702 (-)
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_4739_89
Type: peptidase
Location: 98838 - 99533 (-)
Type: peptidase
Location: 98838 - 99533 (-)
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_4739_90
Type: TC
Location: 99712 - 101232 (-)
Type: TC
Location: 99712 - 101232 (-)
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_4739_91
Type: TC
Location: 101225 - 101953 (-)
Type: TC
Location: 101225 - 101953 (-)
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_4739_92
Type: pfam
Location: 101946 - 102911 (-)
Type: pfam
Location: 101946 - 102911 (-)
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_4739_93
Type: TF
Location: 102929 - 103378 (-)
Type: TF
Location: 102929 - 103378 (-)
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_4739_94
Type: TC
Location: 103635 - 104618 (+)
Type: TC
Location: 103635 - 104618 (+)
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_4739_95
Type: pfam
Location: 104611 - 105399 (+)
Type: pfam
Location: 104611 - 105399 (+)
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_4739_96
Type: TC
Location: 105412 - 106137 (+)
Type: TC
Location: 105412 - 106137 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus sp030825825
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| ShaoY_2019_ERR3404958_bin.2_k141_4739_91 | vegan > omnivore | 2.08686 | 0.00732 |
| ShaoY_2019_ERR3404958_bin.2_k141_4739_91 | vegetarian > omnivore | 1.73664 | 0.00266 |