Cluster: ShaoY_2019_ERR3404958_bin.2_CGC11
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 3
- Substrate:
- Genome ID: ShaoY_2019_ERR3404958_bin.2
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3404958_bin.2_k141_2701 | ShaoY_2019_ERR3404958_bin.2_k141_2701_4 | 6064 | 8322 | - | GT35 |
| CAZyme | ShaoY_2019_ERR3404958_bin.2_k141_2701 | ShaoY_2019_ERR3404958_bin.2_k141_2701_5 | 8368 | 9897 | - | GH77 |
| TC | ShaoY_2019_ERR3404958_bin.2_k141_2701 | ShaoY_2019_ERR3404958_bin.2_k141_2701_6 | 10347 | 11603 | + | 3.A.1.1.26 |
| TC | ShaoY_2019_ERR3404958_bin.2_k141_2701 | ShaoY_2019_ERR3404958_bin.2_k141_2701_7 | 11731 | 13029 | + | 3.A.1.1.26 |
| TC | ShaoY_2019_ERR3404958_bin.2_k141_2701 | ShaoY_2019_ERR3404958_bin.2_k141_2701_8 | 13031 | 13873 | + | 3.A.1.1.26 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3404958_bin.2_k141_2701 | ShaoY_2019_ERR3404958_bin.2_k141_2701_9 | 14017 | 14829 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | ShaoY_2019_ERR3404958_bin.2_k141_2701 | ShaoY_2019_ERR3404958_bin.2_k141_2701_10 | 14841 | 15824 | + | LacI |
| CAZyme | ShaoY_2019_ERR3404958_bin.2_k141_2701 | ShaoY_2019_ERR3404958_bin.2_k141_2701_11 | 15833 | 17908 | + | GH13_14 |
| TC | ShaoY_2019_ERR3404958_bin.2_k141_2701 | ShaoY_2019_ERR3404958_bin.2_k141_2701_12 | 17938 | 18879 | - | 2.A.115.1.1 |
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_2701_4
Type: CAZyme
Location: 6064 - 8322 (-)
Type: CAZyme
Location: 6064 - 8322 (-)
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_2701_5
Type: CAZyme
Location: 8368 - 9897 (-)
Type: CAZyme
Location: 8368 - 9897 (-)
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_2701_6
Type: TC
Location: 10347 - 11603 (+)
Type: TC
Location: 10347 - 11603 (+)
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_2701_7
Type: TC
Location: 11731 - 13029 (+)
Type: TC
Location: 11731 - 13029 (+)
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_2701_8
Type: TC
Location: 13031 - 13873 (+)
Type: TC
Location: 13031 - 13873 (+)
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_2701_9
Type:
Location: 14017 - 14829 (+)
Type:
Location: 14017 - 14829 (+)
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_2701_10
Type: TF
Location: 14841 - 15824 (+)
Type: TF
Location: 14841 - 15824 (+)
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_2701_11
Type: CAZyme
Location: 15833 - 17908 (+)
Type: CAZyme
Location: 15833 - 17908 (+)
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_2701_12
Type: TC
Location: 17938 - 18879 (-)
Type: TC
Location: 17938 - 18879 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus sp030825825
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.