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Cluster: ShaoY_2019_ERR3404958_bin.2_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ShaoY_2019_ERR3404958_bin.2_k141_552 ShaoY_2019_ERR3404958_bin.2_k141_552_7 6030 8192 + GH36
TC ShaoY_2019_ERR3404958_bin.2_k141_552 ShaoY_2019_ERR3404958_bin.2_k141_552_8 8207 9466 + 3.A.1.1.28
TC ShaoY_2019_ERR3404958_bin.2_k141_552 ShaoY_2019_ERR3404958_bin.2_k141_552_9 9480 10346 + 3.A.1.1.28
TC ShaoY_2019_ERR3404958_bin.2_k141_552 ShaoY_2019_ERR3404958_bin.2_k141_552_10 10360 11193 + 3.A.1.1.28
CAZyme ShaoY_2019_ERR3404958_bin.2_k141_552 ShaoY_2019_ERR3404958_bin.2_k141_552_11 11491 12933 + GH13_18
CAZyme ShaoY_2019_ERR3404958_bin.2_k141_552 ShaoY_2019_ERR3404958_bin.2_k141_552_12 13059 15380 + GH3
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_552_7
Type: CAZyme
Location: 6030 - 8192 (+)
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_552_8
Type: TC
Location: 8207 - 9466 (+)
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_552_9
Type: TC
Location: 9480 - 10346 (+)
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_552_10
Type: TC
Location: 10360 - 11193 (+)
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_552_11
Type: CAZyme
Location: 11491 - 12933 (+)
Gene ID: ShaoY_2019_ERR3404958_bin.2_k141_552_12
Type: CAZyme
Location: 13059 - 15380 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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