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Cluster: ShaoY_2019_ERR3404908_bin.6_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ShaoY_2019_ERR3404908_bin.6_k141_3656 ShaoY_2019_ERR3404908_bin.6_k141_3656_9 8352 9512 - GT2
CAZyme ShaoY_2019_ERR3404908_bin.6_k141_3656 ShaoY_2019_ERR3404908_bin.6_k141_3656_10 9916 10911 - GT2
pfam ShaoY_2019_ERR3404908_bin.6_k141_3656 ShaoY_2019_ERR3404908_bin.6_k141_3656_11 10904 12019 - EpsG
CAZyme ShaoY_2019_ERR3404908_bin.6_k141_3656 ShaoY_2019_ERR3404908_bin.6_k141_3656_12 12214 13206 - GT2
CAZyme ShaoY_2019_ERR3404908_bin.6_k141_3656 ShaoY_2019_ERR3404908_bin.6_k141_3656_13 13211 14044 - GT2
TC ShaoY_2019_ERR3404908_bin.6_k141_3656 ShaoY_2019_ERR3404908_bin.6_k141_3656_14 14045 14710 - 9.B.18.1.2
Gene ID: ShaoY_2019_ERR3404908_bin.6_k141_3656_9
Type: CAZyme
Location: 8352 - 9512 (-)
Gene ID: ShaoY_2019_ERR3404908_bin.6_k141_3656_10
Type: CAZyme
Location: 9916 - 10911 (-)
Gene ID: ShaoY_2019_ERR3404908_bin.6_k141_3656_11
Type: pfam
Location: 10904 - 12019 (-)
Gene ID: ShaoY_2019_ERR3404908_bin.6_k141_3656_12
Type: CAZyme
Location: 12214 - 13206 (-)
Gene ID: ShaoY_2019_ERR3404908_bin.6_k141_3656_13
Type: CAZyme
Location: 13211 - 14044 (-)
Gene ID: ShaoY_2019_ERR3404908_bin.6_k141_3656_14
Type: TC
Location: 14045 - 14710 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
ShaoY_2019_ERR3404908_bin.6_k141_3656_14 vegan > omnivore 1.18249 0.01057

🧭 Explore Read Mapping of CGC

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