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Cluster: ShaoY_2019_ERR3404908_bin.6_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3404908_bin.6_k141_9693 ShaoY_2019_ERR3404908_bin.6_k141_9693_4 5476 7035 + 2.A.2.5.1
CAZyme ShaoY_2019_ERR3404908_bin.6_k141_9693 ShaoY_2019_ERR3404908_bin.6_k141_9693_5 7150 8745 + GH28
peptidase ShaoY_2019_ERR3404908_bin.6_k141_9693 ShaoY_2019_ERR3404908_bin.6_k141_9693_6 8841 9650 + S09.UPW
CAZyme ShaoY_2019_ERR3404908_bin.6_k141_9693 ShaoY_2019_ERR3404908_bin.6_k141_9693_7 9647 11812 + CE19 | CE8
pfam ShaoY_2019_ERR3404908_bin.6_k141_9693 ShaoY_2019_ERR3404908_bin.6_k141_9693_8 11882 12550 + Lipase_GDSL | Lipase_GDSL_2
CAZyme ShaoY_2019_ERR3404908_bin.6_k141_9693 ShaoY_2019_ERR3404908_bin.6_k141_9693_9 12657 13895 + GH105
Gene ID: ShaoY_2019_ERR3404908_bin.6_k141_9693_4
Type: TC
Location: 5476 - 7035 (+)
Gene ID: ShaoY_2019_ERR3404908_bin.6_k141_9693_5
Type: CAZyme
Location: 7150 - 8745 (+)
Gene ID: ShaoY_2019_ERR3404908_bin.6_k141_9693_6
Type: peptidase
Location: 8841 - 9650 (+)
Gene ID: ShaoY_2019_ERR3404908_bin.6_k141_9693_7
Type: CAZyme
Location: 9647 - 11812 (+)
Gene ID: ShaoY_2019_ERR3404908_bin.6_k141_9693_8
Type: pfam
Location: 11882 - 12550 (+)
Gene ID: ShaoY_2019_ERR3404908_bin.6_k141_9693_9
Type: CAZyme
Location: 12657 - 13895 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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