Cluster: ShaoY_2019_ERR3404906_bin.10_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3404906_bin.10
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3404906_bin.10_k141_909 | ShaoY_2019_ERR3404906_bin.10_k141_909_67 | 80029 | 81582 | - | 2.A.2.1.1 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3404906_bin.10_k141_909 | ShaoY_2019_ERR3404906_bin.10_k141_909_68 | 81603 | 82040 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | ShaoY_2019_ERR3404906_bin.10_k141_909 | ShaoY_2019_ERR3404906_bin.10_k141_909_69 | 82042 | 85302 | - | GH3 |
| CAZyme | ShaoY_2019_ERR3404906_bin.10_k141_909 | ShaoY_2019_ERR3404906_bin.10_k141_909_70 | 85334 | 87295 | - | GH2 |
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_909_67
Type: TC
Location: 80029 - 81582 (-)
Type: TC
Location: 80029 - 81582 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_909_68
Type:
Location: 81603 - 82040 (-)
Type:
Location: 81603 - 82040 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_909_69
Type: CAZyme
Location: 82042 - 85302 (-)
Type: CAZyme
Location: 82042 - 85302 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_909_70
Type: CAZyme
Location: 85334 - 87295 (-)
Type: CAZyme
Location: 85334 - 87295 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lacrimispora
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.