Cluster: ShaoY_2019_ERR3404906_bin.10_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: ShaoY_2019_ERR3404906_bin.10
- CGC Family ID: CGCFAM_00458
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3404906_bin.10_k141_909 | ShaoY_2019_ERR3404906_bin.10_k141_909_57 | 65830 | 67617 | - | 3.A.1.106.2 |
| CAZyme | ShaoY_2019_ERR3404906_bin.10_k141_909 | ShaoY_2019_ERR3404906_bin.10_k141_909_58 | 67626 | 68306 | - | CE12 |
| CAZyme | ShaoY_2019_ERR3404906_bin.10_k141_909 | ShaoY_2019_ERR3404906_bin.10_k141_909_59 | 68263 | 70095 | - | CBM91 | GH43_12 |
| CAZyme | ShaoY_2019_ERR3404906_bin.10_k141_909 | ShaoY_2019_ERR3404906_bin.10_k141_909_60 | 70058 | 71575 | - | CBM91 | GH43_10 |
| TC | ShaoY_2019_ERR3404906_bin.10_k141_909 | ShaoY_2019_ERR3404906_bin.10_k141_909_61 | 71662 | 72498 | - | 3.A.1.1.9 |
| TC | ShaoY_2019_ERR3404906_bin.10_k141_909 | ShaoY_2019_ERR3404906_bin.10_k141_909_62 | 72512 | 73375 | - | 3.A.1.1.29 |
| TC | ShaoY_2019_ERR3404906_bin.10_k141_909 | ShaoY_2019_ERR3404906_bin.10_k141_909_63 | 73490 | 75073 | - | 3.A.1.1.9 |
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_909_57
Type: TC
Location: 65830 - 67617 (-)
Type: TC
Location: 65830 - 67617 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_909_58
Type: CAZyme
Location: 67626 - 68306 (-)
Type: CAZyme
Location: 67626 - 68306 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_909_59
Type: CAZyme
Location: 68263 - 70095 (-)
Type: CAZyme
Location: 68263 - 70095 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_909_60
Type: CAZyme
Location: 70058 - 71575 (-)
Type: CAZyme
Location: 70058 - 71575 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_909_61
Type: TC
Location: 71662 - 72498 (-)
Type: TC
Location: 71662 - 72498 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_909_62
Type: TC
Location: 72512 - 73375 (-)
Type: TC
Location: 72512 - 73375 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_909_63
Type: TC
Location: 73490 - 75073 (-)
Type: TC
Location: 73490 - 75073 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lacrimispora
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.