Cluster: ShaoY_2019_ERR3404906_bin.10_CGC52
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate: beta-glucan
- Genome ID: ShaoY_2019_ERR3404906_bin.10
- CGC Family ID: CGCFAM_00042
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3404906_bin.10_k141_8864 | ShaoY_2019_ERR3404906_bin.10_k141_8864_50 | 46341 | 47573 | + | 4.A.3.2.6 |
| pfam | ShaoY_2019_ERR3404906_bin.10_k141_8864 | ShaoY_2019_ERR3404906_bin.10_k141_8864_51 | 47614 | 47970 | + | PTS_IIA |
| CAZyme | ShaoY_2019_ERR3404906_bin.10_k141_8864 | ShaoY_2019_ERR3404906_bin.10_k141_8864_52 | 47974 | 49422 | + | GH1 |
| pfam | ShaoY_2019_ERR3404906_bin.10_k141_8864 | ShaoY_2019_ERR3404906_bin.10_k141_8864_53 | 49659 | 50144 | + | C_GCAxxG_C_C |
| TC | ShaoY_2019_ERR3404906_bin.10_k141_8864 | ShaoY_2019_ERR3404906_bin.10_k141_8864_54 | 50146 | 51063 | + | 2.A.16.6.1 |
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_8864_50
Type: TC
Location: 46341 - 47573 (+)
Type: TC
Location: 46341 - 47573 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_8864_51
Type: pfam
Location: 47614 - 47970 (+)
Type: pfam
Location: 47614 - 47970 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_8864_52
Type: CAZyme
Location: 47974 - 49422 (+)
Type: CAZyme
Location: 47974 - 49422 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_8864_53
Type: pfam
Location: 49659 - 50144 (+)
Type: pfam
Location: 49659 - 50144 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_8864_54
Type: TC
Location: 50146 - 51063 (+)
Type: TC
Location: 50146 - 51063 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lacrimispora
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.