Cluster: ShaoY_2019_ERR3404906_bin.10_CGC49
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3404906_bin.10
- CGC Family ID: CGCFAM_02640
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3404906_bin.10_k141_8095 | ShaoY_2019_ERR3404906_bin.10_k141_8095_287 | 308235 | 309965 | - | 1.B.52.2.1 |
| CAZyme | ShaoY_2019_ERR3404906_bin.10_k141_8095 | ShaoY_2019_ERR3404906_bin.10_k141_8095_288 | 310320 | 311315 | - | GH130_7 |
| TF | ShaoY_2019_ERR3404906_bin.10_k141_8095 | ShaoY_2019_ERR3404906_bin.10_k141_8095_289 | 311332 | 312972 | - | HTH_AraC | HTH_AraC |
| TC | ShaoY_2019_ERR3404906_bin.10_k141_8095 | ShaoY_2019_ERR3404906_bin.10_k141_8095_290 | 312974 | 314794 | - | 8.A.59.2.1 |
| TC | ShaoY_2019_ERR3404906_bin.10_k141_8095 | ShaoY_2019_ERR3404906_bin.10_k141_8095_291 | 314867 | 315709 | - | 3.A.1.1.39 |
| TC | ShaoY_2019_ERR3404906_bin.10_k141_8095 | ShaoY_2019_ERR3404906_bin.10_k141_8095_292 | 315727 | 316665 | - | 3.A.1.1.20 |
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_8095_287
Type: TC
Location: 308235 - 309965 (-)
Type: TC
Location: 308235 - 309965 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_8095_288
Type: CAZyme
Location: 310320 - 311315 (-)
Type: CAZyme
Location: 310320 - 311315 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_8095_289
Type: TF
Location: 311332 - 312972 (-)
Type: TF
Location: 311332 - 312972 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_8095_290
Type: TC
Location: 312974 - 314794 (-)
Type: TC
Location: 312974 - 314794 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_8095_291
Type: TC
Location: 314867 - 315709 (-)
Type: TC
Location: 314867 - 315709 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_8095_292
Type: TC
Location: 315727 - 316665 (-)
Type: TC
Location: 315727 - 316665 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lacrimispora
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.