Cluster: ShaoY_2019_ERR3404906_bin.10_CGC48
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3404906_bin.10
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3404906_bin.10_k141_8095 | ShaoY_2019_ERR3404906_bin.10_k141_8095_227 | 252420 | 253811 | + | 9.B.34.1.4 |
| CAZyme | ShaoY_2019_ERR3404906_bin.10_k141_8095 | ShaoY_2019_ERR3404906_bin.10_k141_8095_228 | 254223 | 255542 | - | GH4 |
| TC | ShaoY_2019_ERR3404906_bin.10_k141_8095 | ShaoY_2019_ERR3404906_bin.10_k141_8095_229 | 255560 | 256834 | - | 4.A.3.2.2 |
| TC | ShaoY_2019_ERR3404906_bin.10_k141_8095 | ShaoY_2019_ERR3404906_bin.10_k141_8095_230 | 256865 | 257167 | - | 4.A.3.2.5 |
| TC | ShaoY_2019_ERR3404906_bin.10_k141_8095 | ShaoY_2019_ERR3404906_bin.10_k141_8095_231 | 257190 | 257492 | - | 4.A.3.2.2 |
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_8095_227
Type: TC
Location: 252420 - 253811 (+)
Type: TC
Location: 252420 - 253811 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_8095_228
Type: CAZyme
Location: 254223 - 255542 (-)
Type: CAZyme
Location: 254223 - 255542 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_8095_229
Type: TC
Location: 255560 - 256834 (-)
Type: TC
Location: 255560 - 256834 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_8095_230
Type: TC
Location: 256865 - 257167 (-)
Type: TC
Location: 256865 - 257167 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_8095_231
Type: TC
Location: 257190 - 257492 (-)
Type: TC
Location: 257190 - 257492 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lacrimispora
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.