Cluster: ShaoY_2019_ERR3404906_bin.10_CGC46
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: ShaoY_2019_ERR3404906_bin.10
- CGC Family ID: CGCFAM_08672
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3404906_bin.10_k141_7659 | ShaoY_2019_ERR3404906_bin.10_k141_7659_17 | 13125 | 14057 | + | 3.A.1.1.10 |
| TC | ShaoY_2019_ERR3404906_bin.10_k141_7659 | ShaoY_2019_ERR3404906_bin.10_k141_7659_18 | 14073 | 14948 | + | 3.A.1.1.10 |
| STP | ShaoY_2019_ERR3404906_bin.10_k141_7659 | ShaoY_2019_ERR3404906_bin.10_k141_7659_19 | 14991 | 16514 | + | SBP_bac_1 |
| TC | ShaoY_2019_ERR3404906_bin.10_k141_7659 | ShaoY_2019_ERR3404906_bin.10_k141_7659_20 | 16604 | 18304 | + | 8.A.59.2.1 |
| TF | ShaoY_2019_ERR3404906_bin.10_k141_7659 | ShaoY_2019_ERR3404906_bin.10_k141_7659_21 | 18292 | 19023 | + | HTH_AraC | HTH_AraC |
| CAZyme | ShaoY_2019_ERR3404906_bin.10_k141_7659 | ShaoY_2019_ERR3404906_bin.10_k141_7659_22 | 19020 | 21071 | + | PL11 |
| CAZyme | ShaoY_2019_ERR3404906_bin.10_k141_7659 | ShaoY_2019_ERR3404906_bin.10_k141_7659_23 | 21085 | 23271 | + | GH3 |
| CAZyme | ShaoY_2019_ERR3404906_bin.10_k141_7659 | ShaoY_2019_ERR3404906_bin.10_k141_7659_24 | 23268 | 24683 | + | GH4 |
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_7659_17
Type: TC
Location: 13125 - 14057 (+)
Type: TC
Location: 13125 - 14057 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_7659_18
Type: TC
Location: 14073 - 14948 (+)
Type: TC
Location: 14073 - 14948 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_7659_19
Type: STP
Location: 14991 - 16514 (+)
Type: STP
Location: 14991 - 16514 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_7659_20
Type: TC
Location: 16604 - 18304 (+)
Type: TC
Location: 16604 - 18304 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_7659_21
Type: TF
Location: 18292 - 19023 (+)
Type: TF
Location: 18292 - 19023 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_7659_22
Type: CAZyme
Location: 19020 - 21071 (+)
Type: CAZyme
Location: 19020 - 21071 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_7659_23
Type: CAZyme
Location: 21085 - 23271 (+)
Type: CAZyme
Location: 21085 - 23271 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_7659_24
Type: CAZyme
Location: 23268 - 24683 (+)
Type: CAZyme
Location: 23268 - 24683 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lacrimispora
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.