Cluster: ShaoY_2019_ERR3404906_bin.10_CGC45
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3404906_bin.10
- CGC Family ID: CGCFAM_01140
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3404906_bin.10_k141_7477 | ShaoY_2019_ERR3404906_bin.10_k141_7477_15 | 13825 | 14763 | + | 3.A.1.1.10 |
| TC | ShaoY_2019_ERR3404906_bin.10_k141_7477 | ShaoY_2019_ERR3404906_bin.10_k141_7477_16 | 14775 | 15671 | + | 3.A.1.1.29 |
| STP | ShaoY_2019_ERR3404906_bin.10_k141_7477 | ShaoY_2019_ERR3404906_bin.10_k141_7477_17 | 15714 | 17303 | + | SBP_bac_1 |
| CAZyme | ShaoY_2019_ERR3404906_bin.10_k141_7477 | ShaoY_2019_ERR3404906_bin.10_k141_7477_18 | 17318 | 19393 | + | GH50 |
| pfam | ShaoY_2019_ERR3404906_bin.10_k141_7477 | ShaoY_2019_ERR3404906_bin.10_k141_7477_19 | 19411 | 21492 | + | DUF6259 |
| TC | ShaoY_2019_ERR3404906_bin.10_k141_7477 | ShaoY_2019_ERR3404906_bin.10_k141_7477_20 | 21685 | 23037 | + | 2.A.26.1.9 |
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_7477_15
Type: TC
Location: 13825 - 14763 (+)
Type: TC
Location: 13825 - 14763 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_7477_16
Type: TC
Location: 14775 - 15671 (+)
Type: TC
Location: 14775 - 15671 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_7477_17
Type: STP
Location: 15714 - 17303 (+)
Type: STP
Location: 15714 - 17303 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_7477_18
Type: CAZyme
Location: 17318 - 19393 (+)
Type: CAZyme
Location: 17318 - 19393 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_7477_19
Type: pfam
Location: 19411 - 21492 (+)
Type: pfam
Location: 19411 - 21492 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_7477_20
Type: TC
Location: 21685 - 23037 (+)
Type: TC
Location: 21685 - 23037 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lacrimispora
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.