Cluster: ShaoY_2019_ERR3404906_bin.10_CGC36
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3404906_bin.10
- CGC Family ID: CGCFAM_00088
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3404906_bin.10_k141_5919 | ShaoY_2019_ERR3404906_bin.10_k141_5919_6 | 4596 | 5501 | + | 1.A.23.2.1 |
| pfam | ShaoY_2019_ERR3404906_bin.10_k141_5919 | ShaoY_2019_ERR3404906_bin.10_k141_5919_7 | 5592 | 6344 | - | SIMPL |
| TC | ShaoY_2019_ERR3404906_bin.10_k141_5919 | ShaoY_2019_ERR3404906_bin.10_k141_5919_8 | 6847 | 8229 | + | 3.A.1.1.45 |
| TC | ShaoY_2019_ERR3404906_bin.10_k141_5919 | ShaoY_2019_ERR3404906_bin.10_k141_5919_9 | 8314 | 9156 | + | 3.A.1.1.45 |
| TC | ShaoY_2019_ERR3404906_bin.10_k141_5919 | ShaoY_2019_ERR3404906_bin.10_k141_5919_10 | 9156 | 10004 | + | 3.A.1.1.45 |
| CAZyme | ShaoY_2019_ERR3404906_bin.10_k141_5919 | ShaoY_2019_ERR3404906_bin.10_k141_5919_11 | 10070 | 11554 | + | GH77 |
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_5919_6
Type: TC
Location: 4596 - 5501 (+)
Type: TC
Location: 4596 - 5501 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_5919_7
Type: pfam
Location: 5592 - 6344 (-)
Type: pfam
Location: 5592 - 6344 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_5919_8
Type: TC
Location: 6847 - 8229 (+)
Type: TC
Location: 6847 - 8229 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_5919_9
Type: TC
Location: 8314 - 9156 (+)
Type: TC
Location: 8314 - 9156 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_5919_10
Type: TC
Location: 9156 - 10004 (+)
Type: TC
Location: 9156 - 10004 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_5919_11
Type: CAZyme
Location: 10070 - 11554 (+)
Type: CAZyme
Location: 10070 - 11554 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lacrimispora
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.