Cluster: ShaoY_2019_ERR3404906_bin.10_CGC34
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3404906_bin.10
- CGC Family ID: CGCFAM_09907
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3404906_bin.10_k141_5786 | ShaoY_2019_ERR3404906_bin.10_k141_5786_29 | 24529 | 26265 | + | 3.A.1.135.7 |
| TC | ShaoY_2019_ERR3404906_bin.10_k141_5786 | ShaoY_2019_ERR3404906_bin.10_k141_5786_30 | 26357 | 28165 | + | 3.A.1.135.5 |
| pfam | ShaoY_2019_ERR3404906_bin.10_k141_5786 | ShaoY_2019_ERR3404906_bin.10_k141_5786_31 | 28270 | 29019 | - | APH |
| CAZyme | ShaoY_2019_ERR3404906_bin.10_k141_5786 | ShaoY_2019_ERR3404906_bin.10_k141_5786_32 | 29207 | 31117 | - | CBM48 | GH13_9 |
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_5786_29
Type: TC
Location: 24529 - 26265 (+)
Type: TC
Location: 24529 - 26265 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_5786_30
Type: TC
Location: 26357 - 28165 (+)
Type: TC
Location: 26357 - 28165 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_5786_31
Type: pfam
Location: 28270 - 29019 (-)
Type: pfam
Location: 28270 - 29019 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_5786_32
Type: CAZyme
Location: 29207 - 31117 (-)
Type: CAZyme
Location: 29207 - 31117 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lacrimispora
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.