Cluster: ShaoY_2019_ERR3404906_bin.10_CGC33
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3404906_bin.10
- CGC Family ID: CGCFAM_00046
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3404906_bin.10_k141_4663 | ShaoY_2019_ERR3404906_bin.10_k141_4663_84 | 72607 | 75075 | - | GT35 |
| pfam | ShaoY_2019_ERR3404906_bin.10_k141_4663 | ShaoY_2019_ERR3404906_bin.10_k141_4663_85 | 75097 | 78210 | - | tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | DUF5915 |
| TC | ShaoY_2019_ERR3404906_bin.10_k141_4663 | ShaoY_2019_ERR3404906_bin.10_k141_4663_86 | 79397 | 80773 | - | 2.A.11.1.3 |
| TC | ShaoY_2019_ERR3404906_bin.10_k141_4663 | ShaoY_2019_ERR3404906_bin.10_k141_4663_87 | 80898 | 83072 | - | 2.A.21.9.1 |
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_4663_84
Type: CAZyme
Location: 72607 - 75075 (-)
Type: CAZyme
Location: 72607 - 75075 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_4663_85
Type: pfam
Location: 75097 - 78210 (-)
Type: pfam
Location: 75097 - 78210 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_4663_86
Type: TC
Location: 79397 - 80773 (-)
Type: TC
Location: 79397 - 80773 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_4663_87
Type: TC
Location: 80898 - 83072 (-)
Type: TC
Location: 80898 - 83072 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lacrimispora
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.