Cluster: ShaoY_2019_ERR3404906_bin.10_CGC30
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3404906_bin.10
- CGC Family ID: CGCFAM_00628
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3404906_bin.10_k141_4465 | ShaoY_2019_ERR3404906_bin.10_k141_4465_55 | 55138 | 57006 | - | 3.A.3.6.10 |
| STP | ShaoY_2019_ERR3404906_bin.10_k141_4465 | ShaoY_2019_ERR3404906_bin.10_k141_4465_56 | 57023 | 57247 | - | HMA |
| TF | ShaoY_2019_ERR3404906_bin.10_k141_4465 | ShaoY_2019_ERR3404906_bin.10_k141_4465_57 | 57262 | 57624 | - | HTH_5 |
| CAZyme | ShaoY_2019_ERR3404906_bin.10_k141_4465 | ShaoY_2019_ERR3404906_bin.10_k141_4465_58 | 57783 | 58721 | - | GH25 |
| TC | ShaoY_2019_ERR3404906_bin.10_k141_4465 | ShaoY_2019_ERR3404906_bin.10_k141_4465_59 | 58815 | 59912 | - | 2.A.86.1.3 |
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_4465_55
Type: TC
Location: 55138 - 57006 (-)
Type: TC
Location: 55138 - 57006 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_4465_56
Type: STP
Location: 57023 - 57247 (-)
Type: STP
Location: 57023 - 57247 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_4465_57
Type: TF
Location: 57262 - 57624 (-)
Type: TF
Location: 57262 - 57624 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_4465_58
Type: CAZyme
Location: 57783 - 58721 (-)
Type: CAZyme
Location: 57783 - 58721 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_4465_59
Type: TC
Location: 58815 - 59912 (-)
Type: TC
Location: 58815 - 59912 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lacrimispora
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.