Cluster: ShaoY_2019_ERR3404906_bin.10_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: ShaoY_2019_ERR3404906_bin.10
- CGC Family ID: CGCFAM_01510
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3404906_bin.10_k141_677 | ShaoY_2019_ERR3404906_bin.10_k141_677_31 | 35936 | 36856 | + | 3.A.1.1.10 |
| TC | ShaoY_2019_ERR3404906_bin.10_k141_677 | ShaoY_2019_ERR3404906_bin.10_k141_677_32 | 36874 | 37776 | + | 3.A.1.1.29 |
| TC | ShaoY_2019_ERR3404906_bin.10_k141_677 | ShaoY_2019_ERR3404906_bin.10_k141_677_33 | 37815 | 39347 | + | 3.A.1.1.9 |
| CAZyme | ShaoY_2019_ERR3404906_bin.10_k141_677 | ShaoY_2019_ERR3404906_bin.10_k141_677_34 | 39432 | 42551 | + | GH106 |
| CAZyme | ShaoY_2019_ERR3404906_bin.10_k141_677 | ShaoY_2019_ERR3404906_bin.10_k141_677_35 | 42564 | 44702 | + | GH105 |
| CAZyme | ShaoY_2019_ERR3404906_bin.10_k141_677 | ShaoY_2019_ERR3404906_bin.10_k141_677_36 | 44699 | 46006 | + | GH28 |
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_677_31
Type: TC
Location: 35936 - 36856 (+)
Type: TC
Location: 35936 - 36856 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_677_32
Type: TC
Location: 36874 - 37776 (+)
Type: TC
Location: 36874 - 37776 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_677_33
Type: TC
Location: 37815 - 39347 (+)
Type: TC
Location: 37815 - 39347 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_677_34
Type: CAZyme
Location: 39432 - 42551 (+)
Type: CAZyme
Location: 39432 - 42551 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_677_35
Type: CAZyme
Location: 42564 - 44702 (+)
Type: CAZyme
Location: 42564 - 44702 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_677_36
Type: CAZyme
Location: 44699 - 46006 (+)
Type: CAZyme
Location: 44699 - 46006 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lacrimispora
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.