Cluster: ShaoY_2019_ERR3404906_bin.10_CGC29
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3404906_bin.10
- CGC Family ID: CGCFAM_00201
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3404906_bin.10_k141_4465 | ShaoY_2019_ERR3404906_bin.10_k141_4465_13 | 11801 | 13849 | - | GH73 |
| TC | ShaoY_2019_ERR3404906_bin.10_k141_4465 | ShaoY_2019_ERR3404906_bin.10_k141_4465_14 | 14065 | 15477 | - | 3.B.1.1.6 |
| TC | ShaoY_2019_ERR3404906_bin.10_k141_4465 | ShaoY_2019_ERR3404906_bin.10_k141_4465_15 | 15500 | 15919 | - | 3.B.1.1.2 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3404906_bin.10_k141_4465 | ShaoY_2019_ERR3404906_bin.10_k141_4465_16 | 15941 | 16714 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | ShaoY_2019_ERR3404906_bin.10_k141_4465 | ShaoY_2019_ERR3404906_bin.10_k141_4465_17 | 16732 | 18165 | - | 3.B.1.1.5 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3404906_bin.10_k141_4465 | ShaoY_2019_ERR3404906_bin.10_k141_4465_18 | 18294 | 18860 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | ShaoY_2019_ERR3404906_bin.10_k141_4465 | ShaoY_2019_ERR3404906_bin.10_k141_4465_19 | 18978 | 19823 | - | 2.A.115.1.1 |
| peptidase | ShaoY_2019_ERR3404906_bin.10_k141_4465 | ShaoY_2019_ERR3404906_bin.10_k141_4465_20 | 19878 | 21233 | - | S11.UPW |
| TC | ShaoY_2019_ERR3404906_bin.10_k141_4465 | ShaoY_2019_ERR3404906_bin.10_k141_4465_21 | 21331 | 22215 | - | 2.A.115.1.2 |
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_4465_13
Type: CAZyme
Location: 11801 - 13849 (-)
Type: CAZyme
Location: 11801 - 13849 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_4465_14
Type: TC
Location: 14065 - 15477 (-)
Type: TC
Location: 14065 - 15477 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_4465_15
Type: TC
Location: 15500 - 15919 (-)
Type: TC
Location: 15500 - 15919 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_4465_16
Type:
Location: 15941 - 16714 (-)
Type:
Location: 15941 - 16714 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_4465_17
Type: TC
Location: 16732 - 18165 (-)
Type: TC
Location: 16732 - 18165 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_4465_18
Type:
Location: 18294 - 18860 (-)
Type:
Location: 18294 - 18860 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_4465_19
Type: TC
Location: 18978 - 19823 (-)
Type: TC
Location: 18978 - 19823 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_4465_20
Type: peptidase
Location: 19878 - 21233 (-)
Type: peptidase
Location: 19878 - 21233 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_4465_21
Type: TC
Location: 21331 - 22215 (-)
Type: TC
Location: 21331 - 22215 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lacrimispora
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.