Cluster: ShaoY_2019_ERR3404906_bin.10_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3404906_bin.10
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3404906_bin.10_k141_2864 | ShaoY_2019_ERR3404906_bin.10_k141_2864_10 | 5706 | 6332 | + | 9.A.11.1.1 |
| pfam | ShaoY_2019_ERR3404906_bin.10_k141_2864 | ShaoY_2019_ERR3404906_bin.10_k141_2864_11 | 6322 | 6747 | + | SpoVAB |
| pfam | ShaoY_2019_ERR3404906_bin.10_k141_2864 | ShaoY_2019_ERR3404906_bin.10_k141_2864_12 | 6758 | 7213 | + | SpoVAC_SpoVAEB |
| TC | ShaoY_2019_ERR3404906_bin.10_k141_2864 | ShaoY_2019_ERR3404906_bin.10_k141_2864_13 | 7355 | 8368 | + | 9.A.11.1.1 |
| pfam | ShaoY_2019_ERR3404906_bin.10_k141_2864 | ShaoY_2019_ERR3404906_bin.10_k141_2864_14 | 8394 | 8750 | + | SpoVAC_SpoVAEB |
| CAZyme | ShaoY_2019_ERR3404906_bin.10_k141_2864 | ShaoY_2019_ERR3404906_bin.10_k141_2864_15 | 8820 | 11492 | - | GT51 |
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_2864_10
Type: TC
Location: 5706 - 6332 (+)
Type: TC
Location: 5706 - 6332 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_2864_11
Type: pfam
Location: 6322 - 6747 (+)
Type: pfam
Location: 6322 - 6747 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_2864_12
Type: pfam
Location: 6758 - 7213 (+)
Type: pfam
Location: 6758 - 7213 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_2864_13
Type: TC
Location: 7355 - 8368 (+)
Type: TC
Location: 7355 - 8368 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_2864_14
Type: pfam
Location: 8394 - 8750 (+)
Type: pfam
Location: 8394 - 8750 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_2864_15
Type: CAZyme
Location: 8820 - 11492 (-)
Type: CAZyme
Location: 8820 - 11492 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lacrimispora
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.