Cluster: ShaoY_2019_ERR3404906_bin.10_CGC15
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: ShaoY_2019_ERR3404906_bin.10
- CGC Family ID: CGCFAM_03748
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3404906_bin.10_k141_2285 | ShaoY_2019_ERR3404906_bin.10_k141_2285_30 | 28413 | 30362 | + | GH127 |
| TC | ShaoY_2019_ERR3404906_bin.10_k141_2285 | ShaoY_2019_ERR3404906_bin.10_k141_2285_31 | 30425 | 31795 | + | 3.A.1.1.34 |
| TC | ShaoY_2019_ERR3404906_bin.10_k141_2285 | ShaoY_2019_ERR3404906_bin.10_k141_2285_32 | 31877 | 32761 | + | 3.A.1.1.34 |
| TC | ShaoY_2019_ERR3404906_bin.10_k141_2285 | ShaoY_2019_ERR3404906_bin.10_k141_2285_33 | 32763 | 33632 | + | 3.A.1.1.34 |
| CAZyme | ShaoY_2019_ERR3404906_bin.10_k141_2285 | ShaoY_2019_ERR3404906_bin.10_k141_2285_34 | 33644 | 34615 | + | GH43_26 |
| CAZyme | ShaoY_2019_ERR3404906_bin.10_k141_2285 | ShaoY_2019_ERR3404906_bin.10_k141_2285_35 | 34889 | 35614 | + | GT51 |
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_2285_30
Type: CAZyme
Location: 28413 - 30362 (+)
Type: CAZyme
Location: 28413 - 30362 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_2285_31
Type: TC
Location: 30425 - 31795 (+)
Type: TC
Location: 30425 - 31795 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_2285_32
Type: TC
Location: 31877 - 32761 (+)
Type: TC
Location: 31877 - 32761 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_2285_33
Type: TC
Location: 32763 - 33632 (+)
Type: TC
Location: 32763 - 33632 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_2285_34
Type: CAZyme
Location: 33644 - 34615 (+)
Type: CAZyme
Location: 33644 - 34615 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_2285_35
Type: CAZyme
Location: 34889 - 35614 (+)
Type: CAZyme
Location: 34889 - 35614 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lacrimispora
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.