Cluster: ShaoY_2019_ERR3404906_bin.10_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3404906_bin.10
- CGC Family ID: CGCFAM_00209
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3404906_bin.10_k141_2140 | ShaoY_2019_ERR3404906_bin.10_k141_2140_13 | 9506 | 9766 | - | 1.E.43.1.2 |
| TF | ShaoY_2019_ERR3404906_bin.10_k141_2140 | ShaoY_2019_ERR3404906_bin.10_k141_2140_14 | 10209 | 11063 | + | HTH_6 |
| STP | ShaoY_2019_ERR3404906_bin.10_k141_2140 | ShaoY_2019_ERR3404906_bin.10_k141_2140_15 | 11056 | 11949 | + | SIS |
| TC | ShaoY_2019_ERR3404906_bin.10_k141_2140 | ShaoY_2019_ERR3404906_bin.10_k141_2140_16 | 12027 | 13451 | + | 4.A.1.2.7 |
| CAZyme | ShaoY_2019_ERR3404906_bin.10_k141_2140 | ShaoY_2019_ERR3404906_bin.10_k141_2140_17 | 13452 | 14495 | + | GH170 |
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_2140_13
Type: TC
Location: 9506 - 9766 (-)
Type: TC
Location: 9506 - 9766 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_2140_14
Type: TF
Location: 10209 - 11063 (+)
Type: TF
Location: 10209 - 11063 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_2140_15
Type: STP
Location: 11056 - 11949 (+)
Type: STP
Location: 11056 - 11949 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_2140_16
Type: TC
Location: 12027 - 13451 (+)
Type: TC
Location: 12027 - 13451 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_2140_17
Type: CAZyme
Location: 13452 - 14495 (+)
Type: CAZyme
Location: 13452 - 14495 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lacrimispora
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.