Cluster: ShaoY_2019_ERR3404906_bin.10_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3404906_bin.10
- CGC Family ID: CGCFAM_01446
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3404906_bin.10_k141_1580 | ShaoY_2019_ERR3404906_bin.10_k141_1580_5 | 5805 | 6629 | - | 3.A.1.1.39 |
| TC | ShaoY_2019_ERR3404906_bin.10_k141_1580 | ShaoY_2019_ERR3404906_bin.10_k141_1580_6 | 6626 | 7492 | - | 3.A.1.1.34 |
| STP | ShaoY_2019_ERR3404906_bin.10_k141_1580 | ShaoY_2019_ERR3404906_bin.10_k141_1580_7 | 7546 | 8583 | - | SBP_bac_1 |
| STP | ShaoY_2019_ERR3404906_bin.10_k141_1580 | ShaoY_2019_ERR3404906_bin.10_k141_1580_8 | 8570 | 8992 | - | AraC_binding |
| CAZyme | ShaoY_2019_ERR3404906_bin.10_k141_1580 | ShaoY_2019_ERR3404906_bin.10_k141_1580_9 | 8961 | 10082 | - | GH105 |
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_1580_5
Type: TC
Location: 5805 - 6629 (-)
Type: TC
Location: 5805 - 6629 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_1580_6
Type: TC
Location: 6626 - 7492 (-)
Type: TC
Location: 6626 - 7492 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_1580_7
Type: STP
Location: 7546 - 8583 (-)
Type: STP
Location: 7546 - 8583 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_1580_8
Type: STP
Location: 8570 - 8992 (-)
Type: STP
Location: 8570 - 8992 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_1580_9
Type: CAZyme
Location: 8961 - 10082 (-)
Type: CAZyme
Location: 8961 - 10082 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lacrimispora
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.