dbCAN HGM

Cluster: ShaoY_2019_ERR3404906_bin.10_CGC1

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	ShaoY_2019_ERR3404906_bin.10_k141_251	ShaoY_2019_ERR3404906_bin.10_k141_251_6	7462	8268	+	3.A.1.104.1
TC	ShaoY_2019_ERR3404906_bin.10_k141_251	ShaoY_2019_ERR3404906_bin.10_k141_251_7	8278	9087	+	3.A.1.104.2
pfam	ShaoY_2019_ERR3404906_bin.10_k141_251	ShaoY_2019_ERR3404906_bin.10_k141_251_8	9108	10274	+	CMAS \| TehB \| MTS \| NodS \| PrmA \| MetW \| Methyltransf_9 \| Methyltransf_11 \| Methyltransf_12 \| Methyltransf_18 \| Methyltransf_23 \| Methyltransf_25 \| Methyltransf_31
CAZyme	ShaoY_2019_ERR3404906_bin.10_k141_251	ShaoY_2019_ERR3404906_bin.10_k141_251_9	10296	13598	+	GT4
pfam	ShaoY_2019_ERR3404906_bin.10_k141_251	ShaoY_2019_ERR3404906_bin.10_k141_251_10	13658	14521	+	DUF6270
CAZyme	ShaoY_2019_ERR3404906_bin.10_k141_251	ShaoY_2019_ERR3404906_bin.10_k141_251_11	14539	17388	+	PL12

Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_251_6
Type: TC
Location: 7462 - 8268 (+)

Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_251_7
Type: TC
Location: 8278 - 9087 (+)

Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_251_8
Type: pfam
Location: 9108 - 10274 (+)

Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_251_9
Type: CAZyme
Location: 10296 - 13598 (+)

Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_251_10
Type: pfam
Location: 13658 - 14521 (+)

Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_251_11
Type: CAZyme
Location: 14539 - 17388 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.