Cluster: ShaoY_2019_ERR3404835_bin.5_CGC18
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3404835_bin.5
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3404835_bin.5_k141_3838 | ShaoY_2019_ERR3404835_bin.5_k141_3838_34 | 34141 | 35028 | + | 4.A.1.2.6 |
| TC | ShaoY_2019_ERR3404835_bin.5_k141_3838 | ShaoY_2019_ERR3404835_bin.5_k141_3838_35 | 35053 | 36123 | + | 4.A.1.2.6 |
| CAZyme | ShaoY_2019_ERR3404835_bin.5_k141_3838 | ShaoY_2019_ERR3404835_bin.5_k141_3838_36 | 36140 | 37612 | + | GH1 |
Gene ID: ShaoY_2019_ERR3404835_bin.5_k141_3838_34
Type: TC
Location: 34141 - 35028 (+)
Type: TC
Location: 34141 - 35028 (+)
Gene ID: ShaoY_2019_ERR3404835_bin.5_k141_3838_35
Type: TC
Location: 35053 - 36123 (+)
Type: TC
Location: 35053 - 36123 (+)
Gene ID: ShaoY_2019_ERR3404835_bin.5_k141_3838_36
Type: CAZyme
Location: 36140 - 37612 (+)
Type: CAZyme
Location: 36140 - 37612 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Limosilactobacillus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.