Cluster: ShaoY_2019_ERR3404829_bin.1_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3404829_bin.1
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3404829_bin.1_k141_479 | ShaoY_2019_ERR3404829_bin.1_k141_479_93 | 111584 | 112426 | + | 3.A.1.103.6 |
| TC | ShaoY_2019_ERR3404829_bin.1_k141_479 | ShaoY_2019_ERR3404829_bin.1_k141_479_94 | 112426 | 113718 | + | 3.A.1.103.5 |
| peptidase | ShaoY_2019_ERR3404829_bin.1_k141_479 | ShaoY_2019_ERR3404829_bin.1_k141_479_95 | 113870 | 115594 | + | C40.UPW |
| CAZyme | ShaoY_2019_ERR3404829_bin.1_k141_479 | ShaoY_2019_ERR3404829_bin.1_k141_479_96 | 115681 | 116727 | - | GT2 |
Gene ID: ShaoY_2019_ERR3404829_bin.1_k141_479_93
Type: TC
Location: 111584 - 112426 (+)
Type: TC
Location: 111584 - 112426 (+)
Gene ID: ShaoY_2019_ERR3404829_bin.1_k141_479_94
Type: TC
Location: 112426 - 113718 (+)
Type: TC
Location: 112426 - 113718 (+)
Gene ID: ShaoY_2019_ERR3404829_bin.1_k141_479_95
Type: peptidase
Location: 113870 - 115594 (+)
Type: peptidase
Location: 113870 - 115594 (+)
Gene ID: ShaoY_2019_ERR3404829_bin.1_k141_479_96
Type: CAZyme
Location: 115681 - 116727 (-)
Type: CAZyme
Location: 115681 - 116727 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia sp018375675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.