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Cluster: ShaoY_2019_ERR3404829_bin.1_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3404829_bin.1_k141_479 ShaoY_2019_ERR3404829_bin.1_k141_479_83 98319 99293 - 2.A.7.18.1
TF ShaoY_2019_ERR3404829_bin.1_k141_479 ShaoY_2019_ERR3404829_bin.1_k141_479_84 99290 101119 - 0040266
pfam ShaoY_2019_ERR3404829_bin.1_k141_479 ShaoY_2019_ERR3404829_bin.1_k141_479_85 101214 102767 - DUF2142
CAZyme ShaoY_2019_ERR3404829_bin.1_k141_479 ShaoY_2019_ERR3404829_bin.1_k141_479_86 102796 103959 - GT4
CAZyme ShaoY_2019_ERR3404829_bin.1_k141_479 ShaoY_2019_ERR3404829_bin.1_k141_479_87 104060 105175 + GT4
CAZyme ShaoY_2019_ERR3404829_bin.1_k141_479 ShaoY_2019_ERR3404829_bin.1_k141_479_88 105172 106158 + GT2
Gene ID: ShaoY_2019_ERR3404829_bin.1_k141_479_83
Type: TC
Location: 98319 - 99293 (-)
Gene ID: ShaoY_2019_ERR3404829_bin.1_k141_479_84
Type: TF
Location: 99290 - 101119 (-)
Gene ID: ShaoY_2019_ERR3404829_bin.1_k141_479_85
Type: pfam
Location: 101214 - 102767 (-)
Gene ID: ShaoY_2019_ERR3404829_bin.1_k141_479_86
Type: CAZyme
Location: 102796 - 103959 (-)
Gene ID: ShaoY_2019_ERR3404829_bin.1_k141_479_87
Type: CAZyme
Location: 104060 - 105175 (+)
Gene ID: ShaoY_2019_ERR3404829_bin.1_k141_479_88
Type: CAZyme
Location: 105172 - 106158 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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