Cluster: ShaoY_2019_ERR3404829_bin.1_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3404829_bin.1
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3404829_bin.1_k141_1292 | ShaoY_2019_ERR3404829_bin.1_k141_1292_19 | 18336 | 19559 | + | GT4 |
| TC | ShaoY_2019_ERR3404829_bin.1_k141_1292 | ShaoY_2019_ERR3404829_bin.1_k141_1292_20 | 19596 | 20384 | + | 3.A.1.6.5 |
| pfam | ShaoY_2019_ERR3404829_bin.1_k141_1292 | ShaoY_2019_ERR3404829_bin.1_k141_1292_21 | 20398 | 20871 | + | NfeD |
| TC | ShaoY_2019_ERR3404829_bin.1_k141_1292 | ShaoY_2019_ERR3404829_bin.1_k141_1292_22 | 20918 | 21877 | + | 8.A.21.2.2 |
Gene ID: ShaoY_2019_ERR3404829_bin.1_k141_1292_19
Type: CAZyme
Location: 18336 - 19559 (+)
Type: CAZyme
Location: 18336 - 19559 (+)
Gene ID: ShaoY_2019_ERR3404829_bin.1_k141_1292_20
Type: TC
Location: 19596 - 20384 (+)
Type: TC
Location: 19596 - 20384 (+)
Gene ID: ShaoY_2019_ERR3404829_bin.1_k141_1292_21
Type: pfam
Location: 20398 - 20871 (+)
Type: pfam
Location: 20398 - 20871 (+)
Gene ID: ShaoY_2019_ERR3404829_bin.1_k141_1292_22
Type: TC
Location: 20918 - 21877 (+)
Type: TC
Location: 20918 - 21877 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia sp018375675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.