Cluster: ShaoY_2019_ERR3404781_bin.7_CGC9
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 3
- Substrate:
- Genome ID: ShaoY_2019_ERR3404781_bin.7
- CGC Family ID: CGCFAM_00007
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3404781_bin.7_k141_6012 | ShaoY_2019_ERR3404781_bin.7_k141_6012_72 | 79204 | 79947 | + | 8.A.3.3.4 |
| pfam | ShaoY_2019_ERR3404781_bin.7_k141_6012 | ShaoY_2019_ERR3404781_bin.7_k141_6012_73 | 80832 | 81503 | + | Wzz | GNVR |
| TC | ShaoY_2019_ERR3404781_bin.7_k141_6012 | ShaoY_2019_ERR3404781_bin.7_k141_6012_74 | 81518 | 82255 | + | 8.A.3.2.3 |
| TC | ShaoY_2019_ERR3404781_bin.7_k141_6012 | ShaoY_2019_ERR3404781_bin.7_k141_6012_75 | 82309 | 82971 | + | 9.B.18.1.2 |
| pfam | ShaoY_2019_ERR3404781_bin.7_k141_6012 | ShaoY_2019_ERR3404781_bin.7_k141_6012_76 | 83035 | 84174 | + | Epimerase_2 |
| pfam | ShaoY_2019_ERR3404781_bin.7_k141_6012 | ShaoY_2019_ERR3404781_bin.7_k141_6012_77 | 84176 | 85405 | + | UDPG_MGDP_dh | NAD_binding_2 | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| CAZyme | ShaoY_2019_ERR3404781_bin.7_k141_6012 | ShaoY_2019_ERR3404781_bin.7_k141_6012_78 | 85459 | 87333 | + | PL12 |
| CAZyme | ShaoY_2019_ERR3404781_bin.7_k141_6012 | ShaoY_2019_ERR3404781_bin.7_k141_6012_79 | 87339 | 88571 | + | GT4 |
| CAZyme | ShaoY_2019_ERR3404781_bin.7_k141_6012 | ShaoY_2019_ERR3404781_bin.7_k141_6012_80 | 88601 | 89623 | + | GT4 |
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_6012_72
Type: TC
Location: 79204 - 79947 (+)
Type: TC
Location: 79204 - 79947 (+)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_6012_73
Type: pfam
Location: 80832 - 81503 (+)
Type: pfam
Location: 80832 - 81503 (+)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_6012_74
Type: TC
Location: 81518 - 82255 (+)
Type: TC
Location: 81518 - 82255 (+)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_6012_75
Type: TC
Location: 82309 - 82971 (+)
Type: TC
Location: 82309 - 82971 (+)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_6012_76
Type: pfam
Location: 83035 - 84174 (+)
Type: pfam
Location: 83035 - 84174 (+)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_6012_77
Type: pfam
Location: 84176 - 85405 (+)
Type: pfam
Location: 84176 - 85405 (+)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_6012_78
Type: CAZyme
Location: 85459 - 87333 (+)
Type: CAZyme
Location: 85459 - 87333 (+)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_6012_79
Type: CAZyme
Location: 87339 - 88571 (+)
Type: CAZyme
Location: 87339 - 88571 (+)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_6012_80
Type: CAZyme
Location: 88601 - 89623 (+)
Type: CAZyme
Location: 88601 - 89623 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Terrisporobacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.