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Cluster: ShaoY_2019_ERR3404781_bin.7_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3404781_bin.7_k141_8924 ShaoY_2019_ERR3404781_bin.7_k141_8924_49 60723 61682 - 3.A.11.1.3
pfam ShaoY_2019_ERR3404781_bin.7_k141_8924 ShaoY_2019_ERR3404781_bin.7_k141_8924_50 61752 62354 - Acetyltransf_1 | Acetyltransf_3 | Acetyltransf_4 | Acetyltransf_7 | Acetyltransf_10
pfam ShaoY_2019_ERR3404781_bin.7_k141_8924 ShaoY_2019_ERR3404781_bin.7_k141_8924_51 62485 62973 - Rubrerythrin | Coat_F
CAZyme ShaoY_2019_ERR3404781_bin.7_k141_8924 ShaoY_2019_ERR3404781_bin.7_k141_8924_52 63559 64563 + GH25
TC ShaoY_2019_ERR3404781_bin.7_k141_8924 ShaoY_2019_ERR3404781_bin.7_k141_8924_53 64860 67256 + 2.A.21.9.1
NULL(UNKNOWN) ShaoY_2019_ERR3404781_bin.7_k141_8924 ShaoY_2019_ERR3404781_bin.7_k141_8924_54 67308 67610 + NULL(UNKNOWN)
[View Structural Homologs]
TC ShaoY_2019_ERR3404781_bin.7_k141_8924 ShaoY_2019_ERR3404781_bin.7_k141_8924_55 67798 69153 + 2.A.66.1.32
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_8924_49
Type: TC
Location: 60723 - 61682 (-)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_8924_50
Type: pfam
Location: 61752 - 62354 (-)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_8924_51
Type: pfam
Location: 62485 - 62973 (-)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_8924_52
Type: CAZyme
Location: 63559 - 64563 (+)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_8924_53
Type: TC
Location: 64860 - 67256 (+)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_8924_54
Type:
Location: 67308 - 67610 (+)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_8924_55
Type: TC
Location: 67798 - 69153 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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