Cluster: ShaoY_2019_ERR3404781_bin.7_CGC28
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 4
- Substrate:
- Genome ID: ShaoY_2019_ERR3404781_bin.7
- CGC Family ID: CGCFAM_06474
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3404781_bin.7_k141_7745 | ShaoY_2019_ERR3404781_bin.7_k141_7745_46 | 46705 | 48609 | - | GH13_39 |
| CAZyme | ShaoY_2019_ERR3404781_bin.7_k141_7745 | ShaoY_2019_ERR3404781_bin.7_k141_7745_47 | 48581 | 51037 | - | GT35 |
| CAZyme | ShaoY_2019_ERR3404781_bin.7_k141_7745 | ShaoY_2019_ERR3404781_bin.7_k141_7745_48 | 51050 | 52489 | - | GT5 |
| pfam | ShaoY_2019_ERR3404781_bin.7_k141_7745 | ShaoY_2019_ERR3404781_bin.7_k141_7745_49 | 52511 | 53641 | - | NTP_transferase | Hexapep_GlmU |
| pfam | ShaoY_2019_ERR3404781_bin.7_k141_7745 | ShaoY_2019_ERR3404781_bin.7_k141_7745_50 | 53657 | 54805 | - | NTP_transferase | Hexapep_GlmU |
| CAZyme | ShaoY_2019_ERR3404781_bin.7_k141_7745 | ShaoY_2019_ERR3404781_bin.7_k141_7745_51 | 54840 | 56639 | - | CBM48 | GH13_9 |
| TC | ShaoY_2019_ERR3404781_bin.7_k141_7745 | ShaoY_2019_ERR3404781_bin.7_k141_7745_52 | 57003 | 57956 | - | 8.A.21.2.1 |
| pfam | ShaoY_2019_ERR3404781_bin.7_k141_7745 | ShaoY_2019_ERR3404781_bin.7_k141_7745_53 | 57999 | 58439 | - | NfeD |
| pfam | ShaoY_2019_ERR3404781_bin.7_k141_7745 | ShaoY_2019_ERR3404781_bin.7_k141_7745_54 | 58507 | 60030 | - | Carb_kinase | YjeF_N |
| TC | ShaoY_2019_ERR3404781_bin.7_k141_7745 | ShaoY_2019_ERR3404781_bin.7_k141_7745_55 | 60151 | 62298 | - | 9.B.74.1.1 |
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_7745_46
Type: CAZyme
Location: 46705 - 48609 (-)
Type: CAZyme
Location: 46705 - 48609 (-)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_7745_47
Type: CAZyme
Location: 48581 - 51037 (-)
Type: CAZyme
Location: 48581 - 51037 (-)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_7745_48
Type: CAZyme
Location: 51050 - 52489 (-)
Type: CAZyme
Location: 51050 - 52489 (-)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_7745_49
Type: pfam
Location: 52511 - 53641 (-)
Type: pfam
Location: 52511 - 53641 (-)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_7745_50
Type: pfam
Location: 53657 - 54805 (-)
Type: pfam
Location: 53657 - 54805 (-)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_7745_51
Type: CAZyme
Location: 54840 - 56639 (-)
Type: CAZyme
Location: 54840 - 56639 (-)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_7745_52
Type: TC
Location: 57003 - 57956 (-)
Type: TC
Location: 57003 - 57956 (-)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_7745_53
Type: pfam
Location: 57999 - 58439 (-)
Type: pfam
Location: 57999 - 58439 (-)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_7745_54
Type: pfam
Location: 58507 - 60030 (-)
Type: pfam
Location: 58507 - 60030 (-)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_7745_55
Type: TC
Location: 60151 - 62298 (-)
Type: TC
Location: 60151 - 62298 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Terrisporobacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.