Cluster: ShaoY_2019_ERR3404781_bin.7_CGC26
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3404781_bin.7
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3404781_bin.7_k141_7739 | ShaoY_2019_ERR3404781_bin.7_k141_7739_512 | 505335 | 506777 | - | 4.A.1.1.7 |
| TC | ShaoY_2019_ERR3404781_bin.7_k141_7739 | ShaoY_2019_ERR3404781_bin.7_k141_7739_513 | 506844 | 507344 | - | 4.A.1.2.11 |
| pfam | ShaoY_2019_ERR3404781_bin.7_k141_7739 | ShaoY_2019_ERR3404781_bin.7_k141_7739_514 | 507380 | 508222 | - | PRD | PRD | CAT_RBD |
| TF | ShaoY_2019_ERR3404781_bin.7_k141_7739 | ShaoY_2019_ERR3404781_bin.7_k141_7739_515 | 508435 | 508968 | - | Trans_reg_C |
| CAZyme | ShaoY_2019_ERR3404781_bin.7_k141_7739 | ShaoY_2019_ERR3404781_bin.7_k141_7739_516 | 509019 | 509675 | - | CE4 |
| TC | ShaoY_2019_ERR3404781_bin.7_k141_7739 | ShaoY_2019_ERR3404781_bin.7_k141_7739_517 | 510220 | 511350 | + | 2.A.86.1.8 |
| pfam | ShaoY_2019_ERR3404781_bin.7_k141_7739 | ShaoY_2019_ERR3404781_bin.7_k141_7739_518 | 511422 | 512726 | - | ThiC_Rad_SAM |
| TC | ShaoY_2019_ERR3404781_bin.7_k141_7739 | ShaoY_2019_ERR3404781_bin.7_k141_7739_519 | 513271 | 514497 | - | 2.A.23.4.1 |
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_7739_512
Type: TC
Location: 505335 - 506777 (-)
Type: TC
Location: 505335 - 506777 (-)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_7739_513
Type: TC
Location: 506844 - 507344 (-)
Type: TC
Location: 506844 - 507344 (-)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_7739_514
Type: pfam
Location: 507380 - 508222 (-)
Type: pfam
Location: 507380 - 508222 (-)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_7739_515
Type: TF
Location: 508435 - 508968 (-)
Type: TF
Location: 508435 - 508968 (-)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_7739_516
Type: CAZyme
Location: 509019 - 509675 (-)
Type: CAZyme
Location: 509019 - 509675 (-)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_7739_517
Type: TC
Location: 510220 - 511350 (+)
Type: TC
Location: 510220 - 511350 (+)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_7739_518
Type: pfam
Location: 511422 - 512726 (-)
Type: pfam
Location: 511422 - 512726 (-)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_7739_519
Type: TC
Location: 513271 - 514497 (-)
Type: TC
Location: 513271 - 514497 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Terrisporobacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.