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Cluster: ShaoY_2019_ERR3404781_bin.7_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ShaoY_2019_ERR3404781_bin.7_k141_6811 ShaoY_2019_ERR3404781_bin.7_k141_6811_1 474 2732 + GT35
TC ShaoY_2019_ERR3404781_bin.7_k141_6811 ShaoY_2019_ERR3404781_bin.7_k141_6811_2 2943 4286 + 3.A.1.1.45
TC ShaoY_2019_ERR3404781_bin.7_k141_6811 ShaoY_2019_ERR3404781_bin.7_k141_6811_3 4556 5401 + 3.A.1.1.45
TC ShaoY_2019_ERR3404781_bin.7_k141_6811 ShaoY_2019_ERR3404781_bin.7_k141_6811_4 5401 6255 + 3.A.1.1.45
CAZyme ShaoY_2019_ERR3404781_bin.7_k141_6811 ShaoY_2019_ERR3404781_bin.7_k141_6811_5 6281 7762 + GH77
TF ShaoY_2019_ERR3404781_bin.7_k141_6811 ShaoY_2019_ERR3404781_bin.7_k141_6811_6 7827 8861 + LacI
TC ShaoY_2019_ERR3404781_bin.7_k141_6811 ShaoY_2019_ERR3404781_bin.7_k141_6811_7 8901 10013 + 3.A.1.1.26
TC ShaoY_2019_ERR3404781_bin.7_k141_6811 ShaoY_2019_ERR3404781_bin.7_k141_6811_8 10094 10720 + 9.B.28.1.2
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_6811_1
Type: CAZyme
Location: 474 - 2732 (+)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_6811_2
Type: TC
Location: 2943 - 4286 (+)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_6811_3
Type: TC
Location: 4556 - 5401 (+)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_6811_4
Type: TC
Location: 5401 - 6255 (+)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_6811_5
Type: CAZyme
Location: 6281 - 7762 (+)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_6811_6
Type: TF
Location: 7827 - 8861 (+)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_6811_7
Type: TC
Location: 8901 - 10013 (+)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_6811_8
Type: TC
Location: 10094 - 10720 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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